Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00692 ATGAGTGATGTTAGTGTGAAGGGTTCTTCTTCTTCATGTTTAGCAATAACAGAGAAGAATAATAATAATCAGAAACAAGATGGTAGTTGTGTTGGCATTTTCTTTCAACTATTTGATTGGAATAAAAGACTCACAAAGAAGAGATTTTTCACCAAGAAACTTCTTCCTCCTGATTCTTTGAAGAGGTTTAAAGGTGATGAGAAAATGCCTAATTCTAAGCTCCATTTGATTGCTAATGGGAACAATGTCGGTTTCACGAACACGAAAAAAGGTGAAAATTGTGTTATAGAGGTTGAACAACAAAAGAATGAAATGAAAGTACCAAGTCTTGTAGCTAGGTTGATGGGTCTAGAATCAATTCCAGCTTCAAAGAGAGATAAGTCGGAGAAATCTTCCTTTTCTGATAGTGATGATGGGGAGGAGTCTTTGGAAACCGGGGTTGCAAATGCAAGACATGATTCAAGGCCTCAGAAGCTTCGGAAAACGGAGGCAAACGAGAGAAGGGAAGTGACTAGGTTTGGTGCTGAGGCATTGCAAATCAAGAGTGTTTTGTCGCAAGTGAGAAAGTATAATAATCATCATCATCACCATCACACTAATAAACTTGTTTTGCCTTTGAAGAGTCCGAGAATTTCTTATGGAAAGAGCGGGTCTCGAAGCTCAAGGTTGATAGGAGCAGCTACTAAGATCCTCGAACCTGGCTTGCAGCCTACAAGCAGATCCAAATCTTCTCTTACATCTTCCATTTCTAAGTTTCCTTCCAATAACGGCATTGCCATTGATACGGTTGGAGCTCGGCCACAAGATATACACAACCAATCGTGTTATAATGCCGGCATAGACAAGTCAATGGTGAAGCATACTTGCAAAAATTGTGGCAATTTGCTTGATGTTGAGATCAGCAGACCTATTGATTCAAATGTTTTCACCGATTTTTCTTCGGCATTGACACAAAATGGAAGATTATTCAGTCCTTCTCATGAAAATGATGTAGTTCTTCTGAGAAGTCAAGAGAAGATCATAACTCTTGTTGATGAAGATGTTAAAAAGAATGCTTATTCTTGTAATGAATCCACTTCCATAAGAATACCTGTGCCGGAAAAATGGAATTCGTCACGCCAACTGCATGGAAGCTTAGAGAACGATGACACATCTTCTTTCGCCTTCAGACACAAAACTCAAACGCAGGAACGAGTATTAACCGATGATAAAGTGTTATTTGAATTTGGATCTAGAACAAGTAATATGCAAGAGAAGAGAGTTTCATCTGCTGCAACTGCAAGCACTGCGAATGGAAATAAAGATTTTGTTGGTTTAAATCGAAGTCTAAGTGGTCGGGCTCGGACTCGGACAAGGTCTCCTACCAAGTTGGATAGCTGCAAATTTGATCTTGAGAGGAAAAGAAGGACATTGAATGTCTCACAAGTTGATGATACAGCTTCTTTCAATTTGGTTACATCGAAACAAAGAAATGTTAGTTTTGATGCACAAGGAGGGAAAAGGAGGAGTTTTGATGCTTTCCCTCCAAACAATTCTAATGTCAAAAGTAAACGAGGCAGTTATCGAAAAACTGATAAGATCAATAAGGTAGTTTCATCTACCTTTAGTTCACCTCTTAAGAAAAAGGAAGAAACAAGAAGTGATTATGAGGTTAAGACTTGTTTCAAAAGATATCATCCATCCTTAAGAGAAGATGTTATAGGTGCTTTTCTAGAACAGAAGTTGAAAGAATTAAGGTCTAGAGAAAATAAGGAGCTGGTTAATTGTGATCTACCTAAAAGATCTTCTGCTTTGATTCTTCAAGAATTGATATCTGTTTTAAATGTGGAGCGTCTAAAATGTACCGATGGTCGTATGTTCAAAGACAAAGATCGCATGTGTGAAACAAAACATGTTGGATTATTTGGAACTTCTTGCAATAGTAATCATCTTAGTCCTGGATCAGTCCTAGAAGCTTCCTTTTCTTCTAGTAGTCTCGAAGAAAGCTCAGGTCATTGTTTTCATCCCGACTCTATAAATTGTTCGTATGATCAACCAGAACGGTTGGAACATGAAGCCGAACTATTAAATTCTGAAACATCATTTAACATTGGGAAGATAGGTTATAAGATACTGACTGAACTCGTTAACCGAATTCATTGTATTTTGCAAAGTTTAGATTCTTTTTGGACAAGATTAACAGAAACCAAGCTCAATCATATGAAAGAAGTTATCTTCAACGCCGAATTGATTCTTGGAAACATGACTAGGCACAGTGAGGATGAAGTTCTGCCACAGCTTCTCATTTCTTGCATTCTTGATGAACTAGACAACATTATTGCAACCGATGCTATGCTAAGAAATTTCAACCAAAGCAAAATAAAGGGATTTCTATTTGATTGTTTAATCGAGTATCTAGAATCGAATTGCTTCCAACATTATTACAACGTATTTAGGACATGGTGTTCGTGGACGAAGGTTCCTTTATGCATGAAAGGTGAGATTTTGGTTCAAGAGGTGAAGAGTGAGATTATGAAGTGGGAATTTTTAGCAGGAATGGAACCAAATCAAATAATAGAATGGGAGATGAATCACTCATTGGGGAAATGGACAGATTTCAACATTGAAGCTTTTGAGTTTGGTGTTGATATTGGTGTGGATGTGCTTCAAATTTTGCTTGATGAAATTGTTGAAGACCTTGTAAATTTCAGGATAGTTACTGTATGTTACTAA 2712 0.3739 MSDVSVKGSSSSCLAITEKNNNNQKQDGSCVGIFFQLFDWNKRLTKKRFFTKKLLPPDSLKRFKGDEKMPNSKLHLIANGNNVGFTNTKKGENCVIEVEQQKNEMKVPSLVARLMGLESIPASKRDKSEKSSFSDSDDGEESLETGVANARHDSRPQKLRKTEANERREVTRFGAEALQIKSVLSQVRKYNNHHHHHHTNKLVLPLKSPRISYGKSGSRSSRLIGAATKILEPGLQPTSRSKSSLTSSISKFPSNNGIAIDTVGARPQDIHNQSCYNAGIDKSMVKHTCKNCGNLLDVEISRPIDSNVFTDFSSALTQNGRLFSPSHENDVVLLRSQEKIITLVDEDVKKNAYSCNESTSIRIPVPEKWNSSRQLHGSLENDDTSSFAFRHKTQTQERVLTDDKVLFEFGSRTSNMQEKRVSSAATASTANGNKDFVGLNRSLSGRARTRTRSPTKLDSCKFDLERKRRTLNVSQVDDTASFNLVTSKQRNVSFDAQGGKRRSFDAFPPNNSNVKSKRGSYRKTDKINKVVSSTFSSPLKKKEETRSDYEVKTCFKRYHPSLREDVIGAFLEQKLKELRSRENKELVNCDLPKRSSALILQELISVLNVERLKCTDGRMFKDKDRMCETKHVGLFGTSCNSNHLSPGSVLEASFSSSSLEESSGHCFHPDSINCSYDQPERLEHEAELLNSETSFNIGKIGYKILTELVNRIHCILQSLDSFWTRLTETKLNHMKEVIFNAELILGNMTRHSEDEVLPQLLISCILDELDNIIATDAMLRNFNQSKIKGFLFDCLIEYLESNCFQHYYNVFRTWCSWTKVPLCMKGEILVQEVKSEIMKWEFLAGMEPNQIIEWEMNHSLGKWTDFNIEAFEFGVDIGVDVLQILLDEIVEDLVNFRIVTVCY 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00692 903 Pfam Domain of unknown function (DUF4378) 787 888 IPR025486 -
Trre12g00692 903 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 13 892 - -
Trre12g00692 903 Pfam DUF761-associated sequence motif 99 126 IPR032795 -
Trre12g00692 903 MobiDBLite consensus disorder prediction 121 168 - -
Trre12g00692 903 MobiDBLite consensus disorder prediction 144 168 - -
Trre12g00692 903 MobiDBLite consensus disorder prediction 497 518 - -
Trre12g00692 903 MobiDBLite consensus disorder prediction 121 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00692 Trre-Chr12 5982995 5986727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00692 9 893 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.273 1.11e-82 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00692 - - tpra:123910908 1468.37