Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00691 ATGAGTGATGTTAGTGTGAAGGGTTCTTCTTCTTCATGTTTAGCAATAACAGAGAAGAATAATAATAATCAGAAACAAGATGGTAGTTGTGTTGGCATTTTCTTTCAACTATTTGATTGGAATAAAAGACTCACAAAGAAGAGATTTTTCACCAAGAAACTTCTTCCTCCTGCTAATGCAAACCAAGATTCTTTGAAGAGGTTTAAAGGTGATGAGAAAATGCCTAATTCTAAGCTCCATTTGATTGCTAATGGGAACAATGTCGGTTTCACGAACACGAAAAAAGGTGAAAATTGTGTTATAGAGGTTGAACAACAAAAGAATGAAATGAAAGTACCAAGTCTTGTAGCTAGGTTGATGGGTCTAGAATCAATTCCAGCTTCAAAGAGAGATAAGTCGGAGAAATCTTCCTTTTCTGATAGTGATGATGGGGAGGAGTCTTTGGAAACCGGGGTTGCAAATGCAAGACATGATTCAAGGCCTCAGAAGCTTCGGAAAACGGAGGCAAACGAGAGAAGGGAAGTGACTAGGTTTGGTGCTGAGGCATTGCAAATCAAGAGTGTTTTGTCGCAAGTGAGAAAGTATAATAATCATCATCATCACCATCACACTAATAAACTTGTTTTGCCTTTGAAGAGTCCGAGAATTTCTTATGGAAAGAGCGGGTCTCGAAGCTCAAGGTTGATAGGAGCAGCTACTAAGATCCTCGAACCTGGCTTGCAGCCTACAAGCAGATCCAAATCTTCTCTTACATCTTCCATTTCTAAGTTTCCTTCCAATAACGGCATTGCCATTGATACGGTTGGAGCTCGGCCACAAGATATACACAACCAATCGTGTTATAATGCCGGCATAGACAAGTCAATGGTGAAGCATACTTGCAAAAATTGTGGCAATTTGCTTGATGTTGAGATCAGCAGACCTATTGATTCAAATGTTTTCACCGATTTTTCTTCGGCATTGACACAAAATGGAAGATTATTCAGTCCTTCTCATGAAAATGATGTAGTTCTTCTGAGAAGTCAAGAGAAGATCATAACTCTTGTTGATGAAGATGTTAAAAAGAATGCTTATTCTTGTAATGAATCCACTTCCATAAGAATACCTGTGCCGGAAAAATGGAATTCGTCACGCCAACTGCATGGAAGCTTAGAGAACGATGACACATCTTCTTTCGCCTTCAGACACAAAACTCAAACGCAGGAACGAGTATTAACCGATGATAAAGTGTTATTTGAATTTGGATCTAGAACAAGTAATATGCAAGAGAAGAGAGTTTCATCTGCTGCAACTGCAAGCACTGCGAATGGAAATAAAGATTTTGTTGGTTTAAATCGAAGTCTAAGTGGTCGGGCTCGGACTCGGACAAGGTCTCCTACCAAGTTGGATAGCTGCAAATTTGATCTTGAGAGGAAAAGAAGGACATTGAATGTCTCACAAGTTGATGATACAGCTTCTTTCAATTTGGTTACATCGAAACAAAGAAATGTTAGTTTTGATGCACAAGGAGGGAAAAGGAGGAGTTTTGATGCTTTCCCTCCAAACAATTCTAATGTCAAAAGTAAACGAGGCAGTTATCGAAAAACTGATAAGATCAATAAGGTAGTTTCATCTACCTTTAGTTCACCTCTTAAGAAAAAGGAAGAAACAAGAAGTGATTATGAGGTTAAGACTTGTTTCAAAAGATATCATCCATCCTTAAGAGAAGATGTTATAGGTGCTTTTCTAGAACAGAAGTTGAAAGAATTAAGGTCTAGAGAAAATAAGGAGCTGGTTAATTGTGATCTACCTAAAAGATCTTCTGCTTTGATTCTTCAAGAATTGATATCTGTTTTAAATGTGGAGCGTCTAAAATGTACCGATGGTCGTATGTTCAAAGACAAAGATCGCATGTGTGAAACAAAACATGTTGGATTATTTGGAACTTCTTGCAATAGTAATCATCTTAGTCCTGGATCAGTCCTAGAAGCTTCCTTTTCTTCTAGTAGTCTCGAAGAAAGCTCAGGTCATTGTTTTCATCCCGACTCTATAAATTGTTCGTATGATCAACCAGAACGGTTGGAACATGAAGCCGAACTATTAAATTCTGAAACATCATTTAACATTGGGAAGATAGGTTATAAGATACTGACTGAACTCGTTAACCGAATTCATTGTATTTTGCAAAGTTTAGATTCTTTTTGGACAAGATTAACAGAAACCAAGCTCAATCATATGAAAGAAGTTATCTTCAACGCCGAATTGATTCTTGGAAACATGACTAGGCACAGTGAGGATGAAGTTCTGCCACAGCTTCTCATTTCTTGCATTCTTGATGAACTAGACAACATTATTGCAACCGATGCTATGCTAAGAAATTTCAACCAAAGCAAAATAAAGGGATTTCTATTTGATTGTTTAATCGAGTATCTAGAATCGAATTGCTTCCAACATTATTACAACGTATTTAGGACATGGTGTTCGTGGACGAAGGTTCCTTTATGCATGAAAGGTGAGATTTTGGTTCAAGAGGTGAAGAGTGAGATTATGAAGTGGGAATTTTTAGCAGGAATGGAACCAAATCAAATAATAGAATGGGAGATGAATCACTCATTGGGGAAATGGACAGATTTCAACATTGAAGCTTTTGAGTTTGGTGTTGATATTGGTGTGGATGTGCTTCAAATTTTGCTTGATGAAATTGTTGAAGACCTTGTAAATTTCAGGATAGTTACTGTATGTTACTAA 2727 0.374 MSDVSVKGSSSSCLAITEKNNNNQKQDGSCVGIFFQLFDWNKRLTKKRFFTKKLLPPANANQDSLKRFKGDEKMPNSKLHLIANGNNVGFTNTKKGENCVIEVEQQKNEMKVPSLVARLMGLESIPASKRDKSEKSSFSDSDDGEESLETGVANARHDSRPQKLRKTEANERREVTRFGAEALQIKSVLSQVRKYNNHHHHHHTNKLVLPLKSPRISYGKSGSRSSRLIGAATKILEPGLQPTSRSKSSLTSSISKFPSNNGIAIDTVGARPQDIHNQSCYNAGIDKSMVKHTCKNCGNLLDVEISRPIDSNVFTDFSSALTQNGRLFSPSHENDVVLLRSQEKIITLVDEDVKKNAYSCNESTSIRIPVPEKWNSSRQLHGSLENDDTSSFAFRHKTQTQERVLTDDKVLFEFGSRTSNMQEKRVSSAATASTANGNKDFVGLNRSLSGRARTRTRSPTKLDSCKFDLERKRRTLNVSQVDDTASFNLVTSKQRNVSFDAQGGKRRSFDAFPPNNSNVKSKRGSYRKTDKINKVVSSTFSSPLKKKEETRSDYEVKTCFKRYHPSLREDVIGAFLEQKLKELRSRENKELVNCDLPKRSSALILQELISVLNVERLKCTDGRMFKDKDRMCETKHVGLFGTSCNSNHLSPGSVLEASFSSSSLEESSGHCFHPDSINCSYDQPERLEHEAELLNSETSFNIGKIGYKILTELVNRIHCILQSLDSFWTRLTETKLNHMKEVIFNAELILGNMTRHSEDEVLPQLLISCILDELDNIIATDAMLRNFNQSKIKGFLFDCLIEYLESNCFQHYYNVFRTWCSWTKVPLCMKGEILVQEVKSEIMKWEFLAGMEPNQIIEWEMNHSLGKWTDFNIEAFEFGVDIGVDVLQILLDEIVEDLVNFRIVTVCY 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00691 908 Pfam DUF761-associated sequence motif 104 131 IPR032795 -
Trre12g00691 908 Pfam Domain of unknown function (DUF4378) 792 893 IPR025486 -
Trre12g00691 908 MobiDBLite consensus disorder prediction 126 173 - -
Trre12g00691 908 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 13 897 - -
Trre12g00691 908 MobiDBLite consensus disorder prediction 149 173 - -
Trre12g00691 908 MobiDBLite consensus disorder prediction 126 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00691 Trre-Chr12 5982995 5986727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00691 9 898 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.065 2.94e-82 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00691 - - tpra:123910908 1480.31