Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00674 ATGATGATTATCACGGCCCTTTTGTCCATTTTTGTGACTCTATTTTTTAAAGTTGCTTATGATACAATCTCATGTTATTGGCTTAATCCAATACGTATCAAGAAGATTATGGAGAAGCAAGGTGTGTGTGGCCCAAAAGCACGTTTTCTAACAGGCAACCTTAATGAAATCTCCTCTTTTGTTTCCAAAGCTACTTCACAAGATATGAAAACAATCAACCATGACATTGTTGGTCGTCTTTTGCCTCATTTTGTTGCTTGGTCTAATCAATATGGAAAAAAATTCTTATATTGGAATGGAATTGAGCCTAGGATGTGCCTAACAAAGACTGGATTGATCAAAGAGTTTCTTTCAAAGTACAGCACCATATCTGGAAAATCATGGCAGCAACAACAAGGAACTAAGCATTTTATTGGAAAAGGCTTGTTGATGGCAAATGGTGAAGATTGGTACCACCAACGTCACCTAGTTTCCCCTGCATTCATGGGAGAAAGACTTAAGAGCTATGCTGGTCACATGGTGGAATGCACTAAGGAGATGCTTGAATCACTAAAAAATGCAACATTGGAGTGTGACAAAAATGAAGTGGAAATTGGAGAATACTTCACTAAACTAACTGCAGATATTATCTCTAGAACTGAATTTGGTACAAGCTACAAAAAGGGAAAGCAAATATTTTTCCTTCTCACACAGCTCCAAGCTCTTTGTGCTCAAGCTAGTCGCCAACTTTGCCTTCCTGGAAGTAGGTTTTTTCCTAGCACATACAATAGAGAGATTAAATCATTGAAGATGGAAGTGGAGAGACTCTTGATGGAGATAATACAAAGTAGAAAGGCTTGTGTGAAGATGGGAAGAAGCAATTCTTATGGGAATGACTTATTGGGCATGCTTTTAGATGAGATCCAAAAGAGTGGTAGCTTAAACCTACAATTAGTTATGGATGAATGCAAAACATTCTTTTTTGCAGGACATGAAACAACTGCACTATTACTTACATGGACAGCTATGTTACTTGCTAGCAATCCAAGTTGGCAAGAAAAAGTCAGAATTGAGGTCAAAGAAATTTTCAATCAAGGAATACCATCTATTGATCAACTTTCCAAGCTCAATGTGTTGCATATGGTAATTAATGAGTCAATGAGGCTCTATCCTCCAGCAACCATACTCCCAAGAATGGCCTTTCAAGACATTGTTTTAGGTGACCTTTATATTCCTAAAGGCTTATCAATTTGGATTCCAGTTTTGGCTATTCATCATAGTGAAGAATTATGGGGTAAAGATGCAAATGAATTCAACCCACAAAGATTTGCTTCAAAATCATTCATGCCTGGTCGTTTTATACCATTTGCTTCTGGTCCAAGAAATTGTGTTGGACAATCATTTGCTATGATGGAAGCTAAGATTATATTGGCAATGTTGATCTCTAAGTTTAGCTTCACAATTTCAGAGAATTATAAGCATGCACCAATCACTGTCCTCACAATTAAGCCCAAATATGGTGTTCAAATTTGTTTGAAGCCTTTAGATGCATAA 1533 0.3705 MMIITALLSIFVTLFFKVAYDTISCYWLNPIRIKKIMEKQGVCGPKARFLTGNLNEISSFVSKATSQDMKTINHDIVGRLLPHFVAWSNQYGKKFLYWNGIEPRMCLTKTGLIKEFLSKYSTISGKSWQQQQGTKHFIGKGLLMANGEDWYHQRHLVSPAFMGERLKSYAGHMVECTKEMLESLKNATLECDKNEVEIGEYFTKLTADIISRTEFGTSYKKGKQIFFLLTQLQALCAQASRQLCLPGSRFFPSTYNREIKSLKMEVERLLMEIIQSRKACVKMGRSNSYGNDLLGMLLDEIQKSGSLNLQLVMDECKTFFFAGHETTALLLTWTAMLLASNPSWQEKVRIEVKEIFNQGIPSIDQLSKLNVLHMVINESMRLYPPATILPRMAFQDIVLGDLYIPKGLSIWIPVLAIHHSEELWGKDANEFNPQRFASKSFMPGRFIPFASGPRNCVGQSFAMMEAKIILAMLISKFSFTISENYKHAPITVLTIKPKYGVQICLKPLDA 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00674 510 Gene3D Cytochrome P450 42 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00674 510 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00674 510 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00674 510 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00674 510 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00674 510 Coils Coil 259 279 - -
Trre12g00674 510 SUPERFAMILY Cytochrome P450 76 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00674 510 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00674 510 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00674 510 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00674 510 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00674 510 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00674 510 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00674 510 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00674 510 Pfam Cytochrome P450 84 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00674 510 PANTHER CYTOCHROME P450 FAMILY MEMBER 24 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00674 Trre-Chr12 5792644 5803840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00674 1 369 Cytochrome P450 AT5G38450 66.667 2.37e-169 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00674 K10717 - gmx:100812567 855.129