Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00639 ATGGCAGCTCCGAACAACCACCGTGAAAAGCTTCGTCGAGTCTCCAGCAAAAACATCCACCGGCCTCGTCTTTCTCGGCAACGATCTTTCACAAGCGATATTGAACACGTCGCCGCAGAAACTTACTTGATCACTCGCCTCGCCTTCACGCTTCTTCAGTATCTCGGGGTTGGTTACCGTTGGATTACAAAATTACTAGCTCTTGGATGTTATGCCATGCTACTTATGCCAGGTTTTCTACAAGTTGCATATTGCTATTTCTTCTCAAACAAGGTAAAGCGAAGCATTGTTTATGGAGATCAACCTAGAAACAGGTTGGATCTGTATCTTCCTGCTGATGTCAGTGAACCTAAGCCAGTCTTGGTCTTTGTAACCGGAGGAGCATGGATTATTGGGTATAAAGCATGGGGCTCCCTTTTAGGATTTCAGTTGGCAGAAAGAGACATTATAGTGGCATGCATTGATTACAGAAATTTTCCTCAAGGAACCATCAGTGACATGGTAAATGATACTTGTCAGGGAATTTCCTTTGTCATCAACAACATAGCTAGTTATGGAGGCGACCCTAATAGGATTTACCTAATGGGACAATCTGCTGGTGCACATATTTCGTCTTGTGCTTTATTGGAACAAGCAACCATGGAATCTGGAAATGGAGATGGTATTTCTTGGAGCGTTTCCCAGATAAAAGCTTATTTTGGGTTATCAGGAGGATACAACTTATTGGATTTAGTCGATCACTTTCACAACCGTGGCTTGTATCGTTCCATTTTCTTAAGCATAATGGAAGGTGAACAATCTCTGAAGAAATTTTCTCCCGAAATCAAAATTCAAGATCCATCCATCAAAGATTCCATTCCTCTCTTGCCCCGTATAATTCTTTTCCATGGAACCGGCGATTATTCCATACCATCAATTGCCAGTGAACGGTTTGCTGATGCTCTTAAGAAGGCAGGGGCAAGAGCTGACCTGATTCTATATGATGGGAAAACACATACAGATTTGTTTCTTCAAGATCCACTCCGAGGTGGTAAAGAGGACCTATTTGATCATATAGTTTCTATAGTTCATTCCAATGACAGTGATGCTCTTCTAAAGGATGCCACGGCACCGCCAAGAAGACGGCTTGTTCCTGAGATTCTATTAAAGTTAGCTCATAATATCAGTCCCTTCTAA 1176 0.4226 MAAPNNHREKLRRVSSKNIHRPRLSRQRSFTSDIEHVAAETYLITRLAFTLLQYLGVGYRWITKLLALGCYAMLLMPGFLQVAYCYFFSNKVKRSIVYGDQPRNRLDLYLPADVSEPKPVLVFVTGGAWIIGYKAWGSLLGFQLAERDIIVACIDYRNFPQGTISDMVNDTCQGISFVINNIASYGGDPNRIYLMGQSAGAHISSCALLEQATMESGNGDGISWSVSQIKAYFGLSGGYNLLDLVDHFHNRGLYRSIFLSIMEGEQSLKKFSPEIKIQDPSIKDSIPLLPRIILFHGTGDYSIPSIASERFADALKKAGARADLILYDGKTHTDLFLQDPLRGGKEDLFDHIVSIVHSNDSDALLKDATAPPRRRLVPEILLKLAHNISPF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00639 391 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 32 342 - -
Trre12g00639 391 Pfam BD-FAE 106 315 - -
Trre12g00639 391 Gene3D alpha/beta hydrolase 87 340 IPR029058 -
Trre12g00639 391 SUPERFAMILY alpha/beta-Hydrolases 87 359 IPR029058 -
Trre12g00639 391 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 88 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00639 Trre-Chr12 5430486 5436262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00639 26 391 Carbohydrate Esterase AT1G26120 69.399 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00639 K15889 - gmx:100788814 637.106