Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00606 ATGTTTGCGATATTCAAGCCAAGCAAGTTACCTGCCAGTGCTGACTTTCGCTTGTTTAAGGATGGGATTGAACCAAAATGGGAAGATCCTGAGTGTGCCAATGGAGGAAAGTGGGCCCTTACCAGCAAAGGAAAGGGCAACCTCCATACCGCGTGGCTTGAAATTTTGATGGCTTTAATTGGGGAGCAATTTGGAGACTCTGAGGACATTTGTGGTGTAGTCGTGAGTGTGCGCCAGTGGCAGGACAAACTTTCATTGTGGACAAAAACGGCAGCTAATGAGTCTGTCCAGATTTTATCTTGA 303 0.4653 MFAIFKPSKLPASADFRLFKDGIEPKWEDPECANGGKWALTSKGKGNLHTAWLEILMALIGEQFGDSEDICGVVVSVRQWQDKLSLWTKTAANESVQILS 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00606 100 ProSitePatterns Eukaryotic initiation factor 4E signature. 15 38 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Trre12g00606 100 SUPERFAMILY eIF4e-like 4 96 IPR023398 -
Trre12g00606 100 Pfam Eukaryotic initiation factor 4E 4 95 IPR001040 GO:0003723|GO:0003743|GO:0006413
Trre12g00606 100 Gene3D RNA Cap, Translation Initiation Factor Eif4e 1 100 IPR023398 -
Trre12g00606 100 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 3 94 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00606 Trre-Chr12 5135503 5136370 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00606 4 96 Eukaryotic Initiation Factors Gene Family AT5G35620 62.887 3.80e-36 119