Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00605 ATGTTTGCGATATTCAAGCCAAGCAAGTTACCTGCCAGTGCTGACTTTCGCTTGTTTAAGGATGGGATTGAACCAAAATGGGAAGATCCTGAGTGTGCCAATGGAGGAAAGTGGGCCCTTACCAGCAAAGGAAAGGGCAACCTCCATACCGCGTGGCTTGAAATTTTGATGGCTTTAATTGGGGAGCAATTTGGAGACTCTGAGGACATTTGTGGTGTAGTCGTGAGTGTGCGCCAGTGGCAGGACAAACTTTCATTGTGGACAAAAACGGCAGCTAATGAGTCTGTCCAGGTAAGTGTAGTCATAGTACCAGGAATGTATATCATGGAGCATGTGGATTAG 342 0.4649 MFAIFKPSKLPASADFRLFKDGIEPKWEDPECANGGKWALTSKGKGNLHTAWLEILMALIGEQFGDSEDICGVVVSVRQWQDKLSLWTKTAANESVQVSVVIVPGMYIMEHVD 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00605 113 Gene3D RNA Cap, Translation Initiation Factor Eif4e 1 101 IPR023398 -
Trre12g00605 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 3 95 IPR001040 GO:0003723|GO:0003743|GO:0006413
Trre12g00605 113 SUPERFAMILY eIF4e-like 4 99 IPR023398 -
Trre12g00605 113 ProSitePatterns Eukaryotic initiation factor 4E signature. 15 38 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Trre12g00605 113 Pfam Eukaryotic initiation factor 4E 4 97 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00605 Trre-Chr12 5135503 5137066 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00605 4 100 Eukaryotic Initiation Factors Gene Family AT5G35620 60.396 3.28e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00605 K03259 - gmx:100781892 159.073