Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00577 ATGACAATCGGAACTCTTGCACCGAAGGCAGACAATAAGAAACCAAGGAAGAAGAAGGAAGTTGTTGATGAGAATGCGCCTTTGTTACCTAAGACTCAAGAAACAGATGCCGAATTCCATGAATTTAATGGAGCTTCATTTACCGGGGCTGTTTTCAATTTGTCCACCACAGTTATTGGTGCTGGGATCATGGGCTTGCCTGCTTGCGTCAAAAAATTGGGAATGGTGCCTGGCCTTCTTGCCATAATCCTAACAGCATTATTAACAGAGAAGGCAATTGAGTTCATGATCAGGTTTTCGAGGGCAGGGAATATTTCTTCCTATGGAAGTCTTATGGGGGATGCCTTTGGGAAATACGGAAAAGCTTCGGTAGAGTTATGTATCGTAATCGGTAACATTGGTATTCTTATTGTTTACATGATCATTATTGGTGATGTGATTTCTGGAACAACTTCAAGTGGGATTCACCATTCTGGTATCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACTGGGCGTACATTTGTGATTGTTTTCACAACGCTCGCTGTGTTTGCACCTTTGGTCAGCCTCAAACGAATTGATTCATTGAGATTCACATCTGCATTGTCAATTGGATTAGCAGTTGTTTTCCTTGTCATTGCTGCGGGGATCTCAATTATCAAGATTATTAGTGGAGGCATTGGAATGCCCAGACTCTTCCCCATCATTACTGATGTAGCCTCTGTTCTTGATCTATTCACTGTAGTTCCAGTGCTGATGACAGCCTACATCTGTCACTACAATGAAGTTTCAGTTATGTGGGAGGATGGCATGATTGCATTCATAACATATGAACTGGAGGATTCCTCACAGATGCGTGGGGTTGTGCGTGCTTCCCTTACTCTATGCTCTTCAGTGTACGTACTGACAAGCTTCTTTGGGTTCCTTTTATTTGGCGAAGGAATTCTTGATGACGTGCTTGCAAATTTTGATACTGATCTTGGAATTCCTTTCGGTTCTGCACTCAATGATGCTGTTCGTTTTAGCTATGCTGCGCATCTTGTACTTGTATTTCCTGTAGTGTTCTATGCAGTGAGGGTCAACATAGATGGTCTCATATTTTCCTCTTCAAGAAGGCCTTTGCTTGTTGATAACTTCAGATTTGCATCAATTACTATTGCCCTTGTTGGCACTATCTTCTTGGGAGCAAATTTCATACCTAACATTTGGGTAATTTTCCAGTTTGCTGGAGCAACAAGTTCTGTTTGTATAGCATTCATATTTCCAGCTGCAATCACTCTGAGGGATCGTTATAACATAGCAACTAAAACAGACAGGATTATGTCTTTCCTTATGATAGTCCTTGCAGTCTTGTCAAATGCTATAGCGATATACAGTGATGCCTATGCTTTGATCAACAAGAAAAAAACTTAA 1416 0.4131 MTIGTLAPKADNKKPRKKKEVVDENAPLLPKTQETDAEFHEFNGASFTGAVFNLSTTVIGAGIMGLPACVKKLGMVPGLLAIILTALLTEKAIEFMIRFSRAGNISSYGSLMGDAFGKYGKASVELCIVIGNIGILIVYMIIIGDVISGTTSSGIHHSGILEGWFGVHWWTGRTFVIVFTTLAVFAPLVSLKRIDSLRFTSALSIGLAVVFLVIAAGISIIKIISGGIGMPRLFPIITDVASVLDLFTVVPVLMTAYICHYNEVSVMWEDGMIAFITYELEDSSQMRGVVRASLTLCSSVYVLTSFFGFLLFGEGILDDVLANFDTDLGIPFGSALNDAVRFSYAAHLVLVFPVVFYAVRVNIDGLIFSSSRRPLLVDNFRFASITIALVGTIFLGANFIPNIWVIFQFAGATSSVCIAFIFPAAITLRDRYNIATKTDRIMSFLMIVLAVLSNAIAIYSDAYALINKKKT 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00577 471 MobiDBLite consensus disorder prediction 1 22 - -
Trre12g00577 471 Pfam Transmembrane amino acid transporter protein 45 460 IPR013057 -
Trre12g00577 471 PANTHER AMINO ACID TRANSPORTER 40 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00577 Trre-Chr12 4846864 4850649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00577 18 469 Amino Acid or Auxin Permease AAAP Family AT5G38820 62.115 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00577 K14207 - gmx:100791286 686.026