Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00575 ATGACTACTGGAACTATAACACCTGAGAAGAGGAAAACAAGGAAGAACAAAGAAGTGGTTGATGAGAATGCGCCTTTGGTACCGAAGTCTCAAGAGACAGATACCGAGTTACATGAATTTAATGGAGCTTCATTTTCTGGAGCTGTGTTTAATTTGTCGACGACAATTATTGGTGCTGGAATCATGGGCTTGCCGGCTTGTGTTAAGAAATTGGGAATGGTTCCTGGTCTTATTGCGATAGTGTTAACGGCTTTATTGACAGAGAAGTCGATTGAGTTCATGATCAGGTTTTCGAGGGCAGGAAATATTACTTCCTATGGAAGTCTTATGGGGGATGCTTTTGGGAAATTTGGAAAAGCACTTGTGGAGATATGTGTTGTAATCAATAACACTGGTATTCTGATTGTTTACATGATTATTATCGGTGATGTGATTTCTGGAACAACTTCAAGTGGAATTCACCATCCTGGTATCCTTGAAGGATGGTTTGGTGTTCATTGGTGGACTGGGCGTACATTTGTTCTTGTATTTACGACACTTGCTGTGTTTGCACCTCTGGTTAGCTTTAAGCAAATTGATTCATTGAGATTCACATCTGCATTATCAGTTGGATTAGCAATTGTTTTCCTTATCATTGCCGTGGGGATCTCAATTATCAAGATTATTAGCGGAGGCATTGGGATGCCCAGACTCTTCCCGGTCATTACTGACGCAGCTTCGGTTTTTGATCTATTCACTGTAGTTCCCGTTCTGGTGACCGCTTTCATCTGTCACTACAATGTTCACAACATAGATAATGAACTGGAGGATTCCTCATGGATGCACGGCGTTGTGCGTACTTCCCTCACTCTATGCTCGTCAGTTTACATACTGACAAGCTTCTTTGGGTTCCTCCTATTTGGTGACGATACTCTTGATGATGTTCTTGCCAATTTTGATACTAATCTTGGACTTCCTTTCGGTTCTGTGCTTAATGATGCTGTTCGTTTTAGCTATGCTGCGCATCTCGTGCTTGTATTTCCGGTAGTTTTCTATGCGTTGCGGGTCAACATAGATGGTCTCATATTTTCCTCTTCAAGTAGGCCTTTGGTTGTTGATAACGTCAGGTTTGCATCGATTACTATTGCCCTTGTCGGCAGTATTTTCATCGGAGCAAATTCCATACCTAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACAGCTTCTGTTTGTGTAGGATTCATATTTCCAGCTGCAATTACTCTAAGGGATCATTACAACATAGCAACTAAAACAGACAAGATTCTCTCTGTCTTTATGATAGTTCTTGCCGTCTTGTCAAATGCCGTGGCTATATACAGTGATGCCTATTCCTTGATCAACAAGAATAAAACTTAA 1380 0.4116 MTTGTITPEKRKTRKNKEVVDENAPLVPKSQETDTELHEFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLIAIVLTALLTEKSIEFMIRFSRAGNITSYGSLMGDAFGKFGKALVEICVVINNTGILIVYMIIIGDVISGTTSSGIHHPGILEGWFGVHWWTGRTFVLVFTTLAVFAPLVSFKQIDSLRFTSALSVGLAIVFLIIAVGISIIKIISGGIGMPRLFPVITDAASVFDLFTVVPVLVTAFICHYNVHNIDNELEDSSWMHGVVRTSLTLCSSVYILTSFFGFLLFGDDTLDDVLANFDTNLGLPFGSVLNDAVRFSYAAHLVLVFPVVFYALRVNIDGLIFSSSSRPLVVDNVRFASITIALVGSIFIGANSIPSIWDIFQFTGATASVCVGFIFPAAITLRDHYNIATKTDKILSVFMIVLAVLSNAVAIYSDAYSLINKNKT 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00575 459 MobiDBLite consensus disorder prediction 1 31 - -
Trre12g00575 459 MobiDBLite consensus disorder prediction 8 22 - -
Trre12g00575 459 PANTHER AMINO ACID TRANSPORTER 39 441 - -
Trre12g00575 459 Pfam Transmembrane amino acid transporter protein 43 446 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00575 Trre-Chr12 4841384 4844144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00575 4 457 Amino Acid or Auxin Permease AAAP Family AT3G30390 65.198 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00575 K14207 - gmx:100791286 729.169