Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00523 ATGCCTAATCTTGAAAAGCTAGTACTCATGGATTGTCCAAGGTTGTCTAAAATATCCTCTACCATTGGATATCTTAATAAAGTTCTTCTAATAAATTTGGAAGACTGTGTTGGTCTTCGTAGCCTCCCAAGAAGCATCTATAAACTGAAATCTGTAAAAGCTCTCATCCTTTCTGGGTGTTTAATGATTGACAAGTTGGAAGAGGACATAGAACAGATGGAATCTTTAACCACTTTGATTGCAAATAACACTGCAATAACAAGAGTGCCCTTTTCACTAGTAAGGTCCAAAAGCATTGGATATATTTCTTTGTGCGGCTACGAAGGATTCTCACGTGATGTGTTCCCATCTATCATTATGTCTTGGATGTCACCAACATCTGGTCTTCCTTCCCCGTTTCAAACATCTACTATCATGTCATCTCTTGTTCCTTTAGATGTATCGCATAGTAGTTCGTATGAACTATCATCAATTTCCAAGTACCTTCCAAGTCTTCGAAGTCTTTGGGTAGAGTGCAGCTCAGAACTTCAACTTTCTCATGATGCAGCAATCATTATGGATGCCTTATATGCCACAAATTATAAGGAGTTGGAACCAACTGCAACTACATCACAAGTATCAAATATGTCTACTTCTACATTAATTCAATGTTGCAGTCAAGTGCACGTTTCAGGATCAAAACATTCCTTCAAGTCTCTTTTGATTCAAATGGGAATGAATTGCCAAGTCACTGATCTTGTGAAAGATAAAATTTTACAGAATATTGAAGTCAATGGATGTGATGGTTCTTTGCTCACCGATGATAGTTATCCAGATTGGTTAAGTTTCAGCTGTGAAGGTTCTTCTGTAACTTTTGAAGTTCCTCAAGTGGAAGGGCGTAACTTGAAGACAATTATGTGCGTTGTCTATATTTTAACCCCTGATAACATTACATCGGATGGCCTTAAAAATGTGTTGGTAAAAAATTTCACCAAGGCTACCATTCAGCTCTATAAGAGAGAGGCATTAATCTCCTTTGAAGATGAGGAGGGGCAGAGGGTAGTATCAAGTATTGAACGTGGCAACAAAGTGGAGGTAGCGGTTGTTTTTGAGAACAATTTCATTGTGAAGAATACAACAGTTTATCTTGTATATGAAGAACCAATTGGAAAAAAAAAGAACGCAATGAAGAAAAGTTCAATAGGTCTTGATGTCCGAGGAGTGTTTCTGTCATATTAG 1218 0.3752 MPNLEKLVLMDCPRLSKISSTIGYLNKVLLINLEDCVGLRSLPRSIYKLKSVKALILSGCLMIDKLEEDIEQMESLTTLIANNTAITRVPFSLVRSKSIGYISLCGYEGFSRDVFPSIIMSWMSPTSGLPSPFQTSTIMSSLVPLDVSHSSSYELSSISKYLPSLRSLWVECSSELQLSHDAAIIMDALYATNYKELEPTATTSQVSNMSTSTLIQCCSQVHVSGSKHSFKSLLIQMGMNCQVTDLVKDKILQNIEVNGCDGSLLTDDSYPDWLSFSCEGSSVTFEVPQVEGRNLKTIMCVVYILTPDNITSDGLKNVLVKNFTKATIQLYKREALISFEDEEGQRVVSSIERGNKVEVAVVFENNFIVKNTTVYLVYEEPIGKKKNAMKKSSIGLDVRGVFLSY 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00523 405 SUPERFAMILY RNI-like 1 176 - -
Trre12g00523 405 Gene3D Ribonuclease Inhibitor 1 235 IPR032675 -
Trre12g00523 405 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 3 274 - -
Trre12g00523 405 Coils Coil 63 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00523 Trre-Chr12 4190338 4192148 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00523 2 93 WRKY Transcription Factor Family AT4G12020 33.696 1.12e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00523 - - tpra:123910017 585.489