Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00512 ATGCCTAATCTTGAAAAGCTAATACTCAGAGATTGTTCAATGTTGTCTGAGGTTTCTCCTAGCATTGGAGATCTCAGTAAAATTCTTCTAATAGATTTGGAAGATTGTGTACGCCTTCGTAGCCTTCCAAGAAGCATCTATAAGTTGACATCGTTGAAAACTCTTATTCTTTCTGGGTGTTTAATGATTGACAAGTTGGAAGATGGCTTAGAGGATATGGAATCTTTAACCACTCTAATTGCAAATAACACTGCAATAACAAGTGTGCCCTTTTCAGTAGTAAGGTCAAAAAGTATTGGATATATCTCTTTGTGCGGCTATGAAGGGTTTGCAAGTGACGTGTTTCCATCTATCATTTGGTCTTGGATGTCACCAACAAATAAGCTCACATCCCCATTTCATGCATTTGCTGCCATGTCATCTCTATTTTCTTTAAATGTACCAAGTACTAGTAGTAGTTCCCATGAACTATCATCTTTTTCTAACCACCTTCCAAGTCTTCAAAGTCTTTCGGTGGAGTGCAGCTCAGAACTTCAACTTTCTCAGACTGCAGCAATAATTTTGGATGCCTTACATGCCACAAATTATAAGGAGTTGGAACCAGCTGCAACTACACCACAAGCATCAAATATGACTACTTCTACATTAATTCAATGCTGCAGTCAAGTGCACGTTTCCGGATCAAAACAGTCCTTCCAATCTCTTTTAATTCAAATGGGAATGAATTGCCAAGTCACTGATATTCTGAAAGAGAAAATTTTACAGAATATAGATGTCAACGGGTGTGGTGGTTGTGTGCTCCCTAATGATAGTTTTCCAGATTGGTTAACTTTCAGTTGTGAAGGTTCTTCTGTAACTTTCGATGTTCCTCAAGTGGAAGGGCGTAACTTGAAGACAATGATGTGCGTTGTCTATACTTCTACCCCTGATAACATCACATCGGATGGCCTTAAAAACGTGTTGGTAAATAATTTCACAAAGGCTACCATTGAGCTCTATAAGAGAGAAGCATTAGTCTGCTTTGAAAATGAGGAGAGACAGAGAGTAGTATCAAGTATAGAACCTGGTAACAAAGTGGAGGTTGTTGTTGTTTTTGAGAACAATTTCATTGTGAAGAATACAGCAGTTTATCTCGTATACGAGGAACCGATTGGCAATAAAAAGAACAAGAAAAAGAGAAATCAGATGGGCGAAAATCAATTCTTGTGGTCTTTGAAAATCTTTGTATTAGCAATTGTATTCCAATTTTTGCTGAAGTTTCTTGATTCTATTCATAGTAAAGTTCTGTAA 1290 0.3744 MPNLEKLILRDCSMLSEVSPSIGDLSKILLIDLEDCVRLRSLPRSIYKLTSLKTLILSGCLMIDKLEDGLEDMESLTTLIANNTAITSVPFSVVRSKSIGYISLCGYEGFASDVFPSIIWSWMSPTNKLTSPFHAFAAMSSLFSLNVPSTSSSSHELSSFSNHLPSLQSLSVECSSELQLSQTAAIILDALHATNYKELEPAATTPQASNMTTSTLIQCCSQVHVSGSKQSFQSLLIQMGMNCQVTDILKEKILQNIDVNGCGGCVLPNDSFPDWLTFSCEGSSVTFDVPQVEGRNLKTMMCVVYTSTPDNITSDGLKNVLVNNFTKATIELYKREALVCFENEERQRVVSSIEPGNKVEVVVVFENNFIVKNTAVYLVYEEPIGNKKNKKKRNQMGENQFLWSLKIFVLAIVFQFLLKFLDSIHSKVL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00512 429 Gene3D Ribonuclease Inhibitor 1 200 IPR032675 -
Trre12g00512 429 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 2 283 - -
Trre12g00512 429 SUPERFAMILY RNI-like 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00512 Trre-Chr12 4121553 4123568 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00512 2 93 WRKY Transcription Factor Family AT4G12020 36.957 1.58e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00512 - - tpra:123910017 707.983