Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00456 ATGGTGAGGAGCCTTCGTGTCTCATTGATTTTTGGATGCAGGATACAATACGGGAGATTAATTGAGGAATCAAAGGTTAATGGAGTTACGGTGCCGTCGTTTTCCACCGACACTGAGATAGGCGGTTATCTCTTCGATTTCCTCTTCGCGGCACAAGATGCATCCACATCGTCATTGTTATGGGCGGTGGCATTGTTAGATTCGCATCCGGAGGTTCTTGTCAAAGTCAGAGAGGAAGTTGCTAGAGTTTGGTCACTCTGA 261 0.4674 MVRSLRVSLIFGCRIQYGRLIEESKVNGVTVPSFSTDTEIGGYLFDFLFAAQDASTSSLLWAVALLDSHPEVLVKVREEVARVWSL 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00456 86 Gene3D Cytochrome P450 18 85 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00456 86 Pfam Cytochrome P450 35 83 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00456 86 SUPERFAMILY Cytochrome P450 32 84 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00456 Trre-Chr12 3763993 3764253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00456 32 85 Cytochrome P450 AT2G34500 79.630 3.34e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00456 K09832 - gmx:100808148 108.612