Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre12g00356 | ATGGCTGCTTCATCAATGGCTCTCTCTTCTTCTTCTTTGGTTGGGAAGGCAATCAAGCTTTCCCCGTCCACTTCGGACCTTGGGGTCGGAAGAATCACAATGAGGAAAACAGCCACCAAGAAGAATGTTTCTTCTGGAAGCCCATGGTACGGTCCAGAGTCCAGACCGTGCCAAGTACTTGGGTCCATTCTCTGTAGATGGGCTATGTTGGGTGCCTTGGGATGTGTCTTCCCTGAGCTCTTGGCCCGCAATGGTGTCAAATTCGGCGAGGCCGTATGGTTCAAGGCAGGATCCCAAATCTTCAGTGAGGGTGGACTTGACTACTTGGGCAACCCAAGCCTAGTCCACGCACAAAGTATCCTTGCTATCTGGGCTGTCCAAGTTATCTTAATGGGAGCTGTTGAGGGTTACCGCATTGCTGGTGGACCTCTAGGTGAAGTTGTTGACCCACTATACCCTGGAGGTAGCTTCGACCCATTGGGCCTCGCTGAAGATCCAGAGGCTTTTGCAGAGTTAAAGGTGAAAGAACTCAAGAATGGTAGGTTAGCTATGTTCTCTATGTTCGGTTTCTTCGTTCAGGCTATTGTAACCGGAAAAGGACCTATAGAGAATCTTGCTGACCACCTTGCTGACCCAGTTAACAACAATGCTTGGGCCTATGCTACAAACTTTGCCCCTGGAAAGTGA | 687 | 0.4978 | MAASSMALSSSSLVGKAIKLSPSTSDLGVGRITMRKTATKKNVSSGSPWYGPESRPCQVLGSILCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFAPGK | 228 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre12g00356 | 228 | SUPERFAMILY | Chlorophyll a-b binding protein | 65 | 225 | - | - | |
Trre12g00356 | 228 | Gene3D | Chlorophyll a/b binding protein domain | 62 | 221 | - | - | |
Trre12g00356 | 228 | Pfam | Chlorophyll A-B binding protein | 65 | 194 | IPR022796 | - | |
Trre12g00356 | 228 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 63 | 228 | IPR001344 | GO:0009765|GO:0016020 | |
Trre12g00356 | 228 | FunFam | Chlorophyll a-b binding protein 3A, chloroplastic | 111 | 221 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre12g00356 | Trre-Chr12 | 3019471 | 3020275 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre12g00356 | 1 | 228 | Chloroplast and Mitochondria Gene Families | AT1G29930 | 71.536 | 3.84e-127 | 358 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre12g00356 | K08912 | - | qsu:112030611 | 382.104 |