Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00260 ATGGATTTAGATCTAAGCAGCCTAATAAACACCACAGCAATTACACTCCTAATTTCTCTAATTCCACTACTATTGTATCTATATGGATTTATAAAATTTCCTCATAGCAAAAACAAAGAGGCCCCAATACTTGGTCACCTCCCAATTTTTAGTGGCACACAACCACCCCATAGAGTATTAGGTACCTTAGCTGATAAATATGGACCAATATTCACCATCAAGCTTGGTTCTAAACATGCTTTAATACTCAACAATTGGGAAATGTCCAAGGAATGTTTCACTACAAATGACATGGTTGTTTCGTCTCGTCCCAAACTCGTCACAACCGAACATTTAGCCTATAGAGGAGCCATGTTTGGATTTGCATCCTATGGTCCTTATTGGCGCCACCTACGCAAGATTACAATATTAGAGATCCTCACCAATCGTCGAGTCGAACAATATCAACATGTTTGTGTATCCGAAGTTCAAACATCGATTAAAGAGCTCTTCAATATTTGGTCTAGCAAAAACAATGAGTCACACTCATCAAACTACGTGTTGGTGGATGTGAAGCAATGGTTTACACACTTAACATTTAATATGGTCCTCGGAATGGTTGTTGGAAAGAGATATTTTGGTACAAACACTATTGTTGAGGAAAAAGAAGCTCAAAGAAGAGTGAAAGCTTTGAATAAGATGATGCATTTGTTTGGGGTAATCACAGTGGGAGATGTTATTCCTTGTTTGGAATGGTTTGATTTTGGTGGTCATGTGAAAGCCATGAATGAAACTTCTAAGGAAATGGATGAAATTTTAAGTGAGTGGTTTGAAGGAGTGTCGCCAAAAAAGAACATTGGGTGA 843 0.3796 MDLDLSSLINTTAITLLISLIPLLLYLYGFIKFPHSKNKEAPILGHLPIFSGTQPPHRVLGTLADKYGPIFTIKLGSKHALILNNWEMSKECFTTNDMVVSSRPKLVTTEHLAYRGAMFGFASYGPYWRHLRKITILEILTNRRVEQYQHVCVSEVQTSIKELFNIWSSKNNESHSSNYVLVDVKQWFTHLTFNMVLGMVVGKRYFGTNTIVEEKEAQRRVKALNKMMHLFGVITVGDVIPCLEWFDFGGHVKAMNETSKEMDEILSEWFEGVSPKKNIG 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00260 280 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00260 280 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00260 280 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00260 280 PANTHER CYTOCHROME P450 82C3-RELATED 35 272 - -
Trre12g00260 280 Gene3D Cytochrome P450 33 278 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00260 280 SUPERFAMILY Cytochrome P450 38 271 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00260 280 Pfam Cytochrome P450 40 271 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00260 Trre-Chr12 2180712 2181554 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00260 42 279 Cytochrome P450 AT4G31970 41.079 1.99e-67 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00260 - - gmx:100793075 323.553