Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00259 ATGGCCAAGGAATGTTTCACTACAAATGACATGGCCGTTACGTCTCGACCCGCACTCGTTGCAATAGAACATTTAGCCTATAGAGGAGCCATGTTTGGATTTTCAGCCTACGGTCCTTATTGGAGACGCCTTCGCAAGATTGCAACTTCAGAGATCCTAACTAATCGCAGAGTTGAACAATATCAACATGTTCGTGTTTCCGAAGTTCAAACATCGATTAAAGAGCTTTTCGATATTTGGTTTAGAAAAAAGAACGAGTCATATTCATCAAACTATGTGTTGGTGGATATGAAACAATGGTTTACACAGATAACATTTAATATGGTTCTTAGAATAGTTGTTGGGAAGAGATATTTTGGTGCAAAAACTAATGTTGATGAAAAAGAAGCTCAAAGAAGTGTGAAAGCTTTGAATAAAATGATGCATCTATTTGGAGTAATAACAATTGGAGATGTTATTCCTTGGTTGAAATGGTTTGACTTTGGTGGTCATGTGAAGGCCATGATTGAAACTTCTAAAGAATTGGATGAAATTTTAGGTGAGTTGTTGAAGGAGCGTCGCCATGAAAGAACATTGAGTGAAAATGTTGATGGTCAAGATCAAGACATCATGGATGTGTTGCTTTCATTGCTTGATGGAACAACTATTGAAGGGTTTGATTGTGATACTATAATCAAAGCCACAATATTGACATTATTTACTGGAGGAAGTGACACGAGAGACTCTGAACGAGATTCAGACTCTGAAGGAGATTCAGACTCTGACGGTGATTCAGGCTCTGAAGGTGATTCAGGCTCTGAAGGTGGTCCTGAAGGAGACTCTGAAAGTCAAGGCTCTGATGTTGAAGCTTCTGAAGACAGTACTTCTGAACCTCCAACCTCTGAAGGAAATCATGTGGAACAAGATCAAAGACCACAGAGAATCAGAAGCATTCCAAGAAGGCGCTCTGACTGCATGCCAAGCTGTGTGGATTCTGAACTTGCTACAGGATCTGAAGATTAA 1002 0.3972 MAKECFTTNDMAVTSRPALVAIEHLAYRGAMFGFSAYGPYWRRLRKIATSEILTNRRVEQYQHVRVSEVQTSIKELFDIWFRKKNESYSSNYVLVDMKQWFTQITFNMVLRIVVGKRYFGAKTNVDEKEAQRSVKALNKMMHLFGVITIGDVIPWLKWFDFGGHVKAMIETSKELDEILGELLKERRHERTLSENVDGQDQDIMDVLLSLLDGTTIEGFDCDTIIKATILTLFTGGSDTRDSERDSDSEGDSDSDGDSGSEGDSGSEGGPEGDSESQGSDVEASEDSTSEPPTSEGNHVEQDQRPQRIRSIPRRRSDCMPSCVDSELATGSED 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00259 333 PANTHER CYTOCHROME P450 82C3-RELATED 1 240 - -
Trre12g00259 333 MobiDBLite consensus disorder prediction 235 333 - -
Trre12g00259 333 MobiDBLite consensus disorder prediction 281 299 - -
Trre12g00259 333 Pfam Cytochrome P450 2 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00259 333 Gene3D Cytochrome P450 1 240 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00259 333 MobiDBLite consensus disorder prediction 300 314 - -
Trre12g00259 333 SUPERFAMILY Cytochrome P450 1 239 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00259 Trre-Chr12 2169167 2174825 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00259 1 242 Cytochrome P450 AT4G31940 42.510 6.80e-64 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00259 - - gmx:100805047 296.589