Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00258 ATGGATTTAGTTCTAAGCAATCTAAACGCCACATCAATTGCACTCCTAATTTCTCTAATTCCACTATTATTGATTCTATTAGGATTCACAAAATTTGCTCATAGCAAAAACAAGGAGGCACCCATAGCCAAAGGAGCATGGCCAATATTTGGTCACCTCCCAATCTTTAGTGGCACACAACCACCCCATAGAGTCTTAGGTACCTTAGCTGATAAATATGGACCAATATTCACCATCAAACTAGCTTGGTTCTAA 255 0.3882 MDLVLSNLNATSIALLISLIPLLLILLGFTKFAHSKNKEAPIAKGAWPIFGHLPIFSGTQPPHRVLGTLADKYGPIFTIKLAWF 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00258 84 SUPERFAMILY Cytochrome P450 34 81 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00258 84 Gene3D Cytochrome P450 27 84 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00258 84 PANTHER CYTOCHROME P450 82C3-RELATED 18 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00258 Trre-Chr12 2168884 2169138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00258 1 82 Cytochrome P450 AT2G25160 35.714 1.00e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00258 - - vun:114180909 82.4185