Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00249 ATGGATTTAGTTCTAAACTACCTTAACACTGCAACTATAGCACTAATTGCTCTAATTCCCCTCTTTTTCTTTCTATTCCGTTTCTCCAAAGTTTCTCATACCAAAGAACCTCCTATAGTTTCAGGGTCATGGCCTTTACTAGGCCACCTTCCACTAATGAAAAATACACAAACACCTCACAAAACCTTAGCTGCCTTAGTTGATATATATGGACCCATATTCACAATCAAGCTTGGTGCTACAAATGCTTTGGTACTTAGCAATTGCGAATTAGCCAAAGAATGTTTCACCAAAAACGACATTGTTGTTTCGTCCCGCCCCAAATCGGCCGCGAGAGACCACATGTCGTACAATCAAGCTTTCATTGGTTGGGCACCGTACGGAACATATTGGCGCCAATTAAGAAAAATTGTTACCTTAGAGATTCTCTCAAGCCGTCGAGTTGAACTACTAAGTCACATTCGTGTTTCAGAAGTTCAAACATCGATAAAAGAGCTTGTTAAAGTTTGGTCTAATCAAGTGTCAGTACAAAGTACTAGCGAGTCTAATCTCGCTAGTACTAAAGACTATGTGTCGGTCGAATTGAAGAAATGGTTTGCACAATTGACATTAAATATGGTTCTAAGAATGGTTGTTGGGAAGAGATGTTTTGGTGACATGGTTGATGAGAAAAATAAGGAAGAATCAATAAGGTTTTTGGATAATATAAGAGATTTTATGCGTTTAATTGGGACATTTACCGTAGGAGATGCTGTTCCATTTTTAAAGTGGTTAGATTTGGGAGGTCATGAGAAAGAAATGAAAGAATGTGCAAAGAAATTTGATATATTGTTGAGTGAGTGGTTGGAAGAGCACCGTGAAAAGAAGGTTTTAGGTAGTAATAAGATTGTGGAAGAAAGAGACTTCTTAGATGCTATGCTTTTGGTGCTTAATGACAAACCTATTGAGGGGGTTAGTGCAGATACCATCATCAAAGCCACAACATTGGAATTGATTATAGCAGGAAGTGACTCAACCGCGGGAACACTTTCATGGGCAATGTGTCTACTATTGAAAAATCCCCATCTAGATTACAATACAAAAGGGAAATGGAAGCAGCCACTTTCAAAGCCACGTACAAAGAAAAATGAATTGCAGTCAACATTGAGTTTAATTGGGACATTTATCGTAGGAGATGCTGTTCCATTTTTAAAGAGGTTTGATTTGGGAGGTCATGAGAAAGAAATAAAAGAATGTTCAAAGAAATTTGATATATTGTTGAGTGAGTGGTTGGAAGAGCATCGTGAAAAGAAGGTTTTAGGTAGTGATAAGGTTGTGGGAGAAAGAGACTTCTTGGATGCTATGCTTTTGGTGCTTAATGACAAACCCATTGAGGGATTTAGTGCAGATACCGTAATCAAAGCCACAACATTGGTACGTGTATATAATATTTTAATTTACATTTCATGA 1449 0.3768 MDLVLNYLNTATIALIALIPLFFFLFRFSKVSHTKEPPIVSGSWPLLGHLPLMKNTQTPHKTLAALVDIYGPIFTIKLGATNALVLSNCELAKECFTKNDIVVSSRPKSAARDHMSYNQAFIGWAPYGTYWRQLRKIVTLEILSSRRVELLSHIRVSEVQTSIKELVKVWSNQVSVQSTSESNLASTKDYVSVELKKWFAQLTLNMVLRMVVGKRCFGDMVDEKNKEESIRFLDNIRDFMRLIGTFTVGDAVPFLKWLDLGGHEKEMKECAKKFDILLSEWLEEHREKKVLGSNKIVEERDFLDAMLLVLNDKPIEGVSADTIIKATTLELIIAGSDSTAGTLSWAMCLLLKNPHLDYNTKGKWKQPLSKPRTKKNELQSTLSLIGTFIVGDAVPFLKRFDLGGHEKEIKECSKKFDILLSEWLEEHREKKVLGSDKVVGERDFLDAMLLVLNDKPIEGFSADTVIKATTLVRVYNILIYIS 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00249 482 Gene3D Cytochrome P450 25 356 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00249 482 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00249 482 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00249 482 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00249 482 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00249 482 SUPERFAMILY Cytochrome P450 35 355 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00249 482 ProSiteProfiles RGS domain profile. 203 239 IPR016137 -
Trre12g00249 482 PANTHER CYTOCHROME P450 82C3-RELATED 372 472 - -
Trre12g00249 482 Pfam Cytochrome P450 43 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00249 Trre-Chr12 2096713 2103251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00249 375 474 Cytochrome P450 AT4G31940 35.294 5.48e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00249 - - gmx:100789386 394.815