Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00245 ATGGATTTAGTTCTAAACTATCTTAACACCGCAACCATAGCACTCATTGCTCTAATTTCCCTCTTTTTCTTTCTATTTCGTTTCTCCAAAGTTTCTCATACCAAAGAACCTCCTATAATTTCAGGGTCATGGCCTTTACTAGGCCACCTTCCACTAATGAGAAATACACAAACACCTCACAAAACCTTAGCTGCCTTAGTTGATAAATATGGACCCATATTCACAATCAAGCTTGGTGCTACAAATGCTTTGGTACTTAGCAATTGCAAATTAGTCAAAGAATGTTTCACCAAAAACGACATCGTTGTTTCGTCCCGCCCCAAATCGGCCGCAGGTGAACACATGTCGTACAATCAAGCTTTCATTGGTTGGGCACCGTATGGAACATATTGGCGTCAATTAAGAAAAATTGTTACCTTAGAGATTCTCTCAAGTCGTCGAGTTGAATTACTGAGTCACATTCGTGTTTCAGAAGTTCAAACATCGATAAAAGAGCTTGTTAAAGTTTGGTCTAATCAAGTGTCAGTACAAAGTACTAGTGAGTCTCGTCAAATTCTAAATGTGTTATTTCAAATGTACCCTGGACCCAAATTTGGTCAGTGA 603 0.3881 MDLVLNYLNTATIALIALISLFFFLFRFSKVSHTKEPPIISGSWPLLGHLPLMRNTQTPHKTLAALVDKYGPIFTIKLGATNALVLSNCKLVKECFTKNDIVVSSRPKSAAGEHMSYNQAFIGWAPYGTYWRQLRKIVTLEILSSRRVELLSHIRVSEVQTSIKELVKVWSNQVSVQSTSESRQILNVLFQMYPGPKFGQ 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00245 200 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00245 200 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00245 200 PRINTS E-class P450 group I signature 184 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00245 200 PANTHER CYTOCHROME P450 82C3-RELATED 15 195 - -
Trre12g00245 200 Pfam Cytochrome P450 43 187 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00245 200 SUPERFAMILY Cytochrome P450 35 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00245 200 Gene3D Cytochrome P450 30 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00245 Trre-Chr12 2078078 2078680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00245 8 198 Cytochrome P450 AT4G31940 38.308 9.91e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00245 - - ccaj:109794776 216.083