Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00237 ATGGCAACAACAAAAACATCAACAACAACGTTGTTGCCATTGTTCTTAATCTTTTTAATTAACCTTAATCTCTCCGAATCAAGATTAACATTAGATTACTACAAACAAACATGTCCACAATTTGATCAAATCATTCAACAAACAGTAACATCAAAACAGATCCAATCACCGACAACCGCCGCCGCCACACTCCGTCTCTTCCTCCACGACTGTCTCCTCCCTAACGGCTGCGACGCCTCCGTTCTCCTCTCTTCAACTCCTTTCAACAAAGCAGAACGTGACAACGACATCAATCGCTCTCTTCCCGGCGACGCCTTCGACCTCATCGTACGTATCAAAACCGCACTCGAACTCTCTTGTCCCAACACCGTTTCTTGCTCCGACATCCTCGTTACTGCAACACGTGATCTCTTAGTCATGCTTGGTGGTCCCCACTTCAATGTCTATCTCGGCCGCCGTGATGGTAGAACCTCCGTGTCAACCGCCGTGAACAATTTCCTACCGAAACCAACTATGCCAATGTCGCTGATCATCGACATTTTCGCGAAAAGAGGGTTTACAGTTGAAGAAATGGTTGCTCTTTCTGGTGCTCATACAGTTGGATTCTCTCATTGTTCTGAATTCACCGCAGATATATACAACAATTCTTCAAACTCCGGTGGCGGCGGTGGTTCTTCGTATAATCCTCGATTTATTGAAGGATTAAGAAAAGCTTGTGGTGATTATAAGAATAATCCAACTTTATCTGTTTTTAATGATATTATGACACCAAATAAGTTTGATAATGTTTATTTTCAGAATTTGCCTAAAGGTTTAGGGGTTTTGAAATCTGATCATGGTTTGTTTAGTGATAATTTAACTAAACCTTTTGTGGAAAGATTTGCTGCGGATCAAGATAGATTCTTTAAGGTTTTTGCTAGTTCTATGCAGAAGCTTAGTCTTTTGGGTGTTATGACTGGTAGGAAAGGTGAGATCAGAAGAAGATGTGATCAAATTAATTGA 1002 0.4122 MATTKTSTTTLLPLFLIFLINLNLSESRLTLDYYKQTCPQFDQIIQQTVTSKQIQSPTTAAATLRLFLHDCLLPNGCDASVLLSSTPFNKAERDNDINRSLPGDAFDLIVRIKTALELSCPNTVSCSDILVTATRDLLVMLGGPHFNVYLGRRDGRTSVSTAVNNFLPKPTMPMSLIIDIFAKRGFTVEEMVALSGAHTVGFSHCSEFTADIYNNSSNSGGGGGSSYNPRFIEGLRKACGDYKNNPTLSVFNDIMTPNKFDNVYFQNLPKGLGVLKSDHGLFSDNLTKPFVERFAADQDRFFKVFASSMQKLSLLGVMTGRKGEIRRRCDQIN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00237 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Trre12g00237 333 FunFam Peroxidase 32 173 - -
Trre12g00237 333 PANTHER - 14 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g00237 333 FunFam Peroxidase 168 312 - -
Trre12g00237 333 Pfam Peroxidase 51 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g00237 333 CDD secretory_peroxidase 29 332 IPR033905 GO:0004601|GO:0042744
Trre12g00237 333 Gene3D Peroxidase, domain 2 168 312 - -
Trre12g00237 333 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g00237 333 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g00237 333 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g00237 333 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g00237 333 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g00237 333 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g00237 333 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g00237 333 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g00237 333 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g00237 333 Gene3D - 32 333 - -
Trre12g00237 333 ProSiteProfiles Plant heme peroxidase family profile. 28 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g00237 333 SUPERFAMILY Heme-dependent peroxidases 29 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre12g00237 333 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g00237 333 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g00237 333 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g00237 333 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g00237 333 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00237 Trre-Chr12 2009945 2010946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00237 25 333 Peroxidase AT5G40150 66.019 1.16e-153 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00237 K00430 - gmx:100798144 479.174