Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00192 ATGACAAGAAGATGGTCCTTTTACATGGATTTTCTACCAGTTGTAGTGATTATAGGCTTTGAATTTATTGACATGGGTTTACTGACTTTGTTCAAAGCAGCAACACTTCAAGGGATGAACAATCATGTCTTTATTGCTTATGCTTATGTTGTTGGTACTTCTGTTCTTCTCCCTGTCACTCTTTTCACTAGAAGATCTAGAGTGGTTCCTCCACTTAATTTCTCCATAATATGGAAAAGTGTACTTCTTGGAGCAATAGGATGTTCATCTCAGATTTTGGGGTATATAGGTATTAATTACAGTTCTCCAACACTTGCTTCAGCAATTGCAAATCTGGTACCTGCTTTCACTTTCATACTAGCTGTCACTTTCAGGATGGAAAAGTTAGTTGCAAAGAGTAGAAGTAGTAATGCTAAGGTAATAGGAAGCATAATCTCAATAGCAGGTGCTTTTGTGTTGACTTTCTACAAAGGACCATCCATCATGAACTCTTCATCACTTCATCAACCAATTGACTTTCTCAAATCAGTGAATTCAAGCTGGGCCATCGCAGGCATTATTCTAACAGCTGACTACTTTCTGCTTTCACTATGGTATATTTTACAGGTACATATCTTAAAAGAGTTTCCAGATGAACTAACTTTGGTCTTGTTATACTCCATAACTGCAACCATCATATCTATAGTAGTAGCTTTGTTATCAGTTCCAGATGCAAGTGCTTGGAAAATAGGACTAAATCTCTCACTGATTTCCATTGTTTCTTCTGGAATTTTTGGAAAGTTGATAGGCAATATAATTTATGCATGGTCAGTTCACTTAAAAGGGGCTGTCTATGTAACCTCATTCATGCCATTCCAAATTGTTATTTCTGTTGGCTTAGGAGTTATATTCCTTGGTGATACTCTTCATATTGGAAGTATAATTGGAGCCACAATAATCTCAATTGGCCTTTATGGTGTATTATGGGGCAAAGCAACAGAAGAGTTAGAGGAAGATGTTGGTAGCTTAGAGTCACCATCTATAGAGAGTGCACCATTGTTGCAAAGTTATAGAATTGAAACTTTTGAAAAGAAAACGAATGGAAATGTTTAA 1092 0.3645 MTRRWSFYMDFLPVVVIIGFEFIDMGLLTLFKAATLQGMNNHVFIAYAYVVGTSVLLPVTLFTRRSRVVPPLNFSIIWKSVLLGAIGCSSQILGYIGINYSSPTLASAIANLVPAFTFILAVTFRMEKLVAKSRSSNAKVIGSIISIAGAFVLTFYKGPSIMNSSSLHQPIDFLKSVNSSWAIAGIILTADYFLLSLWYILQVHILKEFPDELTLVLLYSITATIISIVVALLSVPDASAWKIGLNLSLISIVSSGIFGKLIGNIIYAWSVHLKGAVYVTSFMPFQIVISVGLGVIFLGDTLHIGSIIGATIISIGLYGVLWGKATEELEEDVGSLESPSIESAPLLQSYRIETFEKKTNGNV 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00192 363 PANTHER WAT1-RELATED PROTEIN 12 332 IPR030184 GO:0016020|GO:0022857
Trre12g00192 363 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020
Trre12g00192 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Trre12g00192 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00192 Trre-Chr12 1609100 1612173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00192 1 351 Nodulin-like Gene Family AT3G28050 48.077 4.76e-112 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00192 - - tpra:123906528 603.594