Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00191 ATGACTAGAAGATGGTCCATTTACATGGATTTTCTACCAATTGTGGTAATTGTAAGCAATGAATTTAGTGATGTGGCTTTACTCACTTTATACAAAGCAGCTTCACTTCAAGGGATGAACAATCATGTTTTTGTTGCCTATGCTTATGTTGTTGGTACTCTTGTTCTCATTCCTATCACTTTTTTCAGTAAAGGATCAAGAGTGGTTCCTCCACTCAGTTTCTCCATATTATGCAAAATTGTGCTTCTTGGGGCAATAGGATCTTCATGTCAAATTATGGGTTATACTGCTATTGATTATAGTACTCCAACTGTTAGGACAATTGGTAATCTATTACCTGCTATCACTTTCATGTTAGCTGTCATTTTCAGGATGGAAAAGTTAGCTGCAAAGAGTAGAAGTAGTAATGCTAAGGTAATAGGAAGCATGGTATCAATAGCTGGTGCTTTTGTGTTGACTTTCTACAAAGGACCATCCATCATGAATTCTTCATCACTTCATCAACCAATTGGATTTCTCATGTCAGTGAATTCAAGTTGGGCCATTGCTGGCATTATTCTAATATTTGACTATTTTTTTGTTTCAGTATGGTACATCTTAATGGTACATGTGTTAAAAGAGTTCCCAGATGAGCTAACTTTGGTCTTGCTTTCCACCGTTACTTCCACCATCATATCTATAATTGTAGCATTGTTAGCAGTTCCAAATGCAAGTGTTTGGAAAATAGGACTAAATCTCCCACTAATCTCCATTGTTTCTTCTGGAATTTTGAAAGTATTAATGGGAGGTATAGTTCATGCATGGTCATTGCGCCTAAAGGGTGCTGTCTATGTAACATCATTCAAGCCACTCCAAATTGTTATTTCTGTTGCCTTGGGAGTTATATTCCTTAGTGATACTCTTCATGTTGGAAGTGTAATTGGAGCCACAATAATCTCAATTGGGCTTTATGCTGTTTTGTGGGGAAAAGCAACAGAAGAGACAAAAGATGTTGGTAGCTTGGAGTCACCATCAACAGAGAATGCACCTTTGTTGCAAAGTTGTAGAACTGAAAATTTTGAAAAGAAAACAAATGGAATTGTTTGA 1086 0.3665 MTRRWSIYMDFLPIVVIVSNEFSDVALLTLYKAASLQGMNNHVFVAYAYVVGTLVLIPITFFSKGSRVVPPLSFSILCKIVLLGAIGSSCQIMGYTAIDYSTPTVRTIGNLLPAITFMLAVIFRMEKLAAKSRSSNAKVIGSMVSIAGAFVLTFYKGPSIMNSSSLHQPIGFLMSVNSSWAIAGIILIFDYFFVSVWYILMVHVLKEFPDELTLVLLSTVTSTIISIIVALLAVPNASVWKIGLNLPLISIVSSGILKVLMGGIVHAWSLRLKGAVYVTSFKPLQIVISVALGVIFLSDTLHVGSVIGATIISIGLYAVLWGKATEETKDVGSLESPSTENAPLLQSCRTENFEKKTNGIV 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00191 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 323 - -
Trre12g00191 361 PANTHER WAT1-RELATED PROTEIN 12 333 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00191 Trre-Chr12 1599978 1607910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00191 1 352 Nodulin-like Gene Family AT3G28050 43.396 1.56e-96 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00191 - - tpra:123906528 497.664