Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00161 ATGTATCAAGCAATAAATGGCTACAGTGGAACAACTCATATTCAGGGTAACTACCAGAAATGTGAGATAAGGGACGTATCTACTTGTGCGACATACCAGCAAGGAAAATGGTCTATTCAGAACAGAAAGAATGGTCTAGATCCAGCTGCAGCCTCATTTGCTAAAAATCCAAGAGACGGAGATGGTCTTACTGAGGGTGCTAGTATAACGCCAGTTAGATACAAACATAGGGTTTCAACAGAAACTTTGGACAATAAAACTGACAAAGGCGAAGCTTCTCTTGCATCATTGTATAATGAAGTAACTGGTTCATCACCTACCGAAGAGAATAAGATCAATGACATTTTGCAAGGATTGCTTACTTGTGATTCTAAAGAACTAGAGGGGGGTGGAGCAATGAATCTTTTGCAGGAGAAGCTACAGAAACTGCGTGCACTTTCTGTAGAGTGGAAAAGCCTGAAAATTAAGGAAGATGTTTTATCCACAAAATTTGACACATTGTCTCAAATTACCACTGGGGAAGTTGGTCTTGAGGAAGGGTTCATATCTTTGTTCTCAAATACTAGTAAATGTCTGGTTAAGCCACATACTACAACCGCCAATCCTAGTGGTCCTGGGGCATTTGTTGATAGTCTACCTTCAGAAGAGATTCTCAAAGTGAAGTGTAGGTTCAATAGTGTAGATAAAAGCATATCTGTGACACATTCAGATTCTGATAACCTACATATGAATTCAATAGAAGGACAACTTAGGACTGTTCCTGTGGCCGTGGAGTCTCAATTTACAGATAAATCCCTCAAGTCATCATCAAATCATATGCATCAAGCGATAAATGGCTACAGTGGAGCAACTCATATTCAGGTTTCCCAAAATGCTGTGAATGAGTCGGAAACAATAACATACCACGTCGAGCTCAATGCTGTCAAGAGTGACATTTCACTGCTGCATGACTCTATAACTAGTGTAGGATCACAGCTTCTGAAGCTCTTTGTTCGCCGGGATTTTTTGGGTATTGATTCCATTGGTCGACTGTACTGGGCTTTGGCTACCCCAGAGGACGTTCACGTATAG 1071 0.409 MYQAINGYSGTTHIQGNYQKCEIRDVSTCATYQQGKWSIQNRKNGLDPAAASFAKNPRDGDGLTEGASITPVRYKHRVSTETLDNKTDKGEASLASLYNEVTGSSPTEENKINDILQGLLTCDSKELEGGGAMNLLQEKLQKLRALSVEWKSLKIKEDVLSTKFDTLSQITTGEVGLEEGFISLFSNTSKCLVKPHTTTANPSGPGAFVDSLPSEEILKVKCRFNSVDKSISVTHSDSDNLHMNSIEGQLRTVPVAVESQFTDKSLKSSSNHMHQAINGYSGATHIQVSQNAVNESETITYHVELNAVKSDISLLHDSITSVGSQLLKLFVRRDFLGIDSIGRLYWALATPEDVHV 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00161 356 PANTHER OS02G0192300 PROTEIN 135 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00161 Trre-Chr12 1332539 1334827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00161 138 353 C2H2 Transcription Factor Family AT3G01460 28.571 4.83e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00161 K22768 - gmx:100820223 243.432