Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00105 ATGGAAAAGTTATCTGCAAAGAGTAGAAGTAGTAATGCAAAGGTAATGGGAAGCATAATCTCAATAGCCGGTGCTTTTGTGTTGACTTTCTACAAAGGACCACCCATCTTGCAATCTTCCTATACTCATATTTCCTCACCACTTCATCAACCACTTGAATTTCTCAAGTCAGTGGATTCAAGTTGGGCTATTGCTGGCGTTCTGCTAACAGTCGATTATTTTATGGGTTCAATATGGTACATTTTACAGGTACATATCTTGAAAGAGTTTCCAGATGAACTAACATTAGTCTTGTTATACTCCATAGCGGCCACAATTATATCAACAGTTGTAGCTTTGTTATCAGTTCCAAATTCAAGTGCTTGGAAAATAGGATTAAATCTCTCATTGATCTCCATTGTTTCTTCTGGCATTTTCGGTAAGTTGGTAGGAAATATAGTTTCTGCATGGGCATTGCACTTAAAGGGAGCTGTCTATGTAGCCTCATTCAAGCCGCTACAAATTATTATTTCGGTTGGCTTGGGAATTATATTTCTTGGTGATACTCTTTGTTTAGGAAGTATAATTGGAGCAACGATCATCTCGATTGGCCTTTATGGTGTATTATGGGGAAAAGCATCAGAAGAGATAGAGGAAGATGTTGGTATCTTGGAGTCCCCATCTACAGAGAATGCACCTCTTTTGCAAAGCTATAGAACTGATCAAACTTTTGAAAAGACAAAAGATGGAAATGTTTAA 738 0.3767 MEKLSAKSRSSNAKVMGSIISIAGAFVLTFYKGPPILQSSYTHISSPLHQPLEFLKSVDSSWAIAGVLLTVDYFMGSIWYILQVHILKEFPDELTLVLLYSIAATIISTVVALLSVPNSSAWKIGLNLSLISIVSSGIFGKLVGNIVSAWALHLKGAVYVASFKPLQIIISVGLGIIFLGDTLCLGSIIGATIISIGLYGVLWGKASEEIEEDVGILESPSTENAPLLQSYRTDQTFEKTKDGNV 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00105 245 SUPERFAMILY Multidrug resistance efflux transporter EmrE 112 206 - -
Trre12g00105 245 PANTHER WAT1-RELATED PROTEIN 1 218 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00105 Trre-Chr12 841294 842536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00105 1 235 Nodulin-like Gene Family AT3G28050 42.339 6.68e-63 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00105 - - tpra:123906528 446.817