Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00044 ATGCACATCCTTTCATGCTTTAATTTAAAGGTTGAGGAAATAGATGCAAAGCTATGTGACTCAGCAGCAGCAAGTCTTGAGTGCAAAATATTGGCTTCATTTACAAAGATTATTGTGACAAGTCCATACACATCTAAATCATATATCCAACGCATGTTACCTTCCCTCCTTTGGAACTTGTGGCATATTCATGATTTCCTAACTGAGGAATTGAAAAAACAACATAAGAGCACTGCTGAGTTCATGGGACCTTGGTTTACCAAAATGAACTATTTGGTCACTAGTGACCCTATCAATGTGCATCACATCATGAGCAAATGTTTTGCTAATTATGTTAAGGGTCAAGAGTTTCATGAGATTTTTGAAGCCTTTGGGGATGGAATATTCAACGCTGATTCGGAGACATGGAAATACAATAGGTCACTTTTTCACTCTATTTTCAAAGAGAGAGATTTTGAATTGTTTCAAGAGAAAATTATTCGAAACAAGTTGGATAGAAGCTTGATTCCTATATTGGATCATGTTCAACAAAAAGGGTCAGTTGTGGACCTACAAGACGTCTTCAGTCGTTTCACATTCGATAACATTTGTTATGTGGTTCTCGGATGTGATCCTAATTGTCTTTCGATTGATTTCCCCGAAGTTGCGTGCGAGAAGGCTTTTGACCAAATTGAAGAGTGCATATTCTATAGACATGCTATTCCAAAAGGTGTTTGGATATTGCAAAAATTTCTTCAAGTTGGCCAAGAGAAAAAGATGACCAAAGCATCCAAAGAATTTGATGAATTTATATATGCAAACATAGAGTCCAAAAGAGAGGAGCTAAGAAAAGCTACACACCCTTTAGTAGAAACCAAGATTCTTGAAGAGATTAAAGAAAATTTTGGGAGCATTAATAATATTGAAAAGAAGTTAGGGATTGATGATTTGAAAAAGTTGGTTTATCTTCAAGGTGCTATATGTGAGGCTCTAAGGCTTTTTCCTCCTATACCCTTTGAGACCAAGCAAGCAATTAAAGGTGATATACTTCCAAGTGGCCACATTGTTAATCCTAATACAATTATATTATTTTCTTTGTATTCAATGGGTAGAATTGAAGAGACATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATATCTGAAAGAGGAGGCATTGTTCATAATCCATCTTATAAGTTCTTTAGTTTTAATGCTGGACCTAGGACTTGTTTGGGAAAGGACTTGTCCTTTATTCAAATTAAGATGATAGCAATTTCTATTTTGTGCAAGTATCGTGTCCTATTGGTGGAAGGTCGTGTTCCTTTATTAAGCCATTCAATTATACTTCTTATGAAGAATGGTTTCAAGGTTAGGATAACAAAGAGAGAAATTTGA 1383 0.3579 MHILSCFNLKVEEIDAKLCDSAAASLECKILASFTKIIVTSPYTSKSYIQRMLPSLLWNLWHIHDFLTEELKKQHKSTAEFMGPWFTKMNYLVTSDPINVHHIMSKCFANYVKGQEFHEIFEAFGDGIFNADSETWKYNRSLFHSIFKERDFELFQEKIIRNKLDRSLIPILDHVQQKGSVVDLQDVFSRFTFDNICYVVLGCDPNCLSIDFPEVACEKAFDQIEECIFYRHAIPKGVWILQKFLQVGQEKKMTKASKEFDEFIYANIESKREELRKATHPLVETKILEEIKENFGSINNIEKKLGIDDLKKLVYLQGAICEALRLFPPIPFETKQAIKGDILPSGHIVNPNTIILFSLYSMGRIEETWGKDCLEFKPERWISERGGIVHNPSYKFFSFNAGPRTCLGKDLSFIQIKMIAISILCKYRVLLVEGRVPLLSHSIILLMKNGFKVRITKREI 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00044 460 SUPERFAMILY Cytochrome P450 57 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00044 460 Gene3D Cytochrome P450 51 277 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00044 460 PRINTS P450 superfamily signature 279 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00044 460 PRINTS P450 superfamily signature 397 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00044 460 PRINTS P450 superfamily signature 406 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00044 460 PRINTS P450 superfamily signature 318 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00044 460 Gene3D Cytochrome P450 278 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00044 460 PANTHER CYTOCHROME P450 38 274 - -
Trre12g00044 460 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 399 408 IPR017972 GO:0005506|GO:0016705
Trre12g00044 460 CDD CYP86A 80 451 - -
Trre12g00044 460 Pfam Cytochrome P450 56 278 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00044 460 Pfam Cytochrome P450 278 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00044 460 PRINTS E-class P450 group IV signature 313 329 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00044 460 PRINTS E-class P450 group IV signature 390 406 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00044 460 PRINTS E-class P450 group IV signature 406 424 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00044 460 PRINTS E-class P450 group IV signature 364 382 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00044 Trre-Chr12 306554 309529 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00044 52 458 Cytochrome P450 AT4G39490 42.558 4.55e-124 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00044 - - aprc:113867564 545.428