Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00041 ATGTTCATGCTAACACTATCTCTAGCTGTGGCTGTCACACTCATCCTCACCTTATTCCTATATGCTTTTCATCAAACAAAATCACTGAAAACTCCTGCCTTCACAAATTGGCCTTTTATTGGTATGTTACCTCAACTCCTTTGGAACATATCACACATCCATGAATATTTAGCTATATTGTTAAAATCAAAAGGTGGCACAATTGAGCTCATAGGACCATGGTTTACCAAAATGGTGAGTGTAATAACATCTGATCCAATCAATGTTCACCATATCATGAGCAGGAGATTTGACAACTTTGTGAAAGGTGATTCGTATCGTGAAATGTTTGAACCTTTTGGCGAAGGAATTTTCACTACCGATTCACATAAATGGAAATACAATAGGACGCTTCTCCAATTTCTCTTCAAACAAAGAAGCTTTGAAGCTTTTCAAGAAAAAATCATTCACAACAAAGTTGAGAAATCATTGATTCCTTTATTGAATCATGTTCAACAACAAAAAGGGTCGGTGGTTGATTTACAAGATGCCTTCAACCGCTTCACATTCGATAACATTTGTTTGATAGTCCTTGGACATGATCCTAATTGTCTTTCCATTGATTTTCCTGAAGTTGCGGCCGAGAAAGCTTTTAACCAAGCTGAAGAATCCATCTTCTATAGACACACCGTACCGGTGTGTGTTTGGAAGTTGCAAAGCTGGCTTCAAATTGGTGAAGAGAAAAAAATGACTGAGGCATGTAAAATATTTGATCAATTCCTATTTTCATGTATAGCTTCAAAGCGTGAAGAGCTTTTGAAAAATTGTAATAAAAATGAAATCGATGCTGAAAGTGATGAAACTCATCATGTTGATTTGCTAACGGCGTTGATTAGAGAAGAAAAAAAGAATAAGGATAGTGAATCAAATGGTGACAAGTTTCTAAGAGATGCTGTATTCAATCTCTTTGTAGCGGGGAGAGATACTATAACTTCGGCGCTTACATGGCTTTTTCCACCTATACCTTTTGAGAGAAAGGAAGCAGTCACACCCGATATACTTCCAAGTGGTCATCATGTTAATCCAAATACAATGATATTGTTTTCTTTGTATGCAATGGGAAGGGATAAAGATATTTGGGGAGAAGATTACTTGGAGTTCAAGCCAGAGAGGTGGATTTCTGAGAGAGGAGGTATTGTTTATGCGCCGTCTTACAAATTTTTTAGTTTTAATGCTGGACCTAGGACTTGTTTGGGAAGAGATTTGGCTTTCATTCAAATTAAGATGATAACTGCTTCTGTTTTGTGGAACTATGGTGTTCAAGTTGTGGATGTTAATCAAGTCACTCCCAACCTTTCAATTGTACTTCTCATGAAACATGGTCTCAAGGTTAAGATAACTAAAAGGGAAATTTAA 1395 0.367 MFMLTLSLAVAVTLILTLFLYAFHQTKSLKTPAFTNWPFIGMLPQLLWNISHIHEYLAILLKSKGGTIELIGPWFTKMVSVITSDPINVHHIMSRRFDNFVKGDSYREMFEPFGEGIFTTDSHKWKYNRTLLQFLFKQRSFEAFQEKIIHNKVEKSLIPLLNHVQQQKGSVVDLQDAFNRFTFDNICLIVLGHDPNCLSIDFPEVAAEKAFNQAEESIFYRHTVPVCVWKLQSWLQIGEEKKMTEACKIFDQFLFSCIASKREELLKNCNKNEIDAESDETHHVDLLTALIREEKKNKDSESNGDKFLRDAVFNLFVAGRDTITSALTWLFPPIPFERKEAVTPDILPSGHHVNPNTMILFSLYAMGRDKDIWGEDYLEFKPERWISERGGIVYAPSYKFFSFNAGPRTCLGRDLAFIQIKMITASVLWNYGVQVVDVNQVTPNLSIVLLMKHGLKVKITKREI 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00041 464 CDD CYP86A 69 455 - -
Trre12g00041 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 403 412 IPR017972 GO:0005506|GO:0016705
Trre12g00041 464 PANTHER CYTOCHROME P450 21 331 - -
Trre12g00041 464 Gene3D Cytochrome P450 331 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00041 464 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00041 464 PRINTS E-class P450 group I signature 400 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00041 464 PRINTS E-class P450 group I signature 410 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00041 464 SUPERFAMILY Cytochrome P450 24 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00041 464 Pfam Cytochrome P450 331 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00041 464 Pfam Cytochrome P450 33 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00041 464 Gene3D Cytochrome P450 24 330 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00041 Trre-Chr12 268582 270131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00041 1 462 Cytochrome P450 AT2G23180 39.729 2.04e-132 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00041 - - tpra:123904061 839.721