Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04983 ATGTCCCTTCTCTTCTTCTTAATATTCTTGCAGCATTTTTTGTATTCTGTTTGTGCACTCAACTCAGATGGGTTGGCACTCTTATCATTCATGTCTCACTGGACATATGTTCCTCCTCCAATTAACTCCACATGGATTCCATCTCACTCCACACCATGTTCCTGGGTGGGTGTCCAATGTGACCACACCCACCGTGTCATCTCTCTCAACCTTTCCTCTTATGACATTTATGGTCAACTAGGACCTGAAATTTCTAATTGCACACAACTCAAACACTTAGACCTTACTTTGAACTACTTTACTGGCCAAATACCTCCCTCATTCACTAACCTTCACAAACTCACCTATCTCAGTCTTTCTACTAATCTTTTCACTTCTCCATTTCCTCATTTTTTAACTCAGATCCCTCACCTCCACCTTCTTGATCTCTCTTACAACCAATTTACCGGTTCCATTCCAACAAGTATTGCCAACATGACTCAACTTCGCAACTTGTATCTCCAAAATAACAACTTCTCTGGTCCAATACCTTCATCCATTGGGAACTGCACTCAACTGCAAGACTTGTTTTTGAACTCTAATCAATTCCAGGGTGTCATTCCCCATACTCTCAATAATAATAATAATCTTGTTCGTTTTGATGTTGCCTACAATAAACTAACAGGTACCATTCCATTTGGTGGTGCCTCTTCTTCTGGTTGTCAAAATTTACTGTTTTTGGATATCTCATACAACTTCTTCAGTGGAGGAGGCATTCCCTCAGCCATTGGGAATTGTACTTCTTTATCACAATTTGTTGCTGTCAGATGTAACTTGGTTGGAACTATTCCATCCTCTATTGGTCTGCTCACCAAGCTTTCCCTTCTAAGCCTTCCTGAGAACCATTTAACCGGAAAAATACCTCCCGAAATAGGTAACTGTAAGTCTTTGAATCAGTTGCATTTGTATTCCAATCGACTTGATGGAAACATACCGAGTGAATTGGGAAAGCTGAGTGAACTGCAGGACCTTGAGCTGTTTTCCAATCAATTGAGTGGTGAGATTCCACTTGGCATATGGAAGATTCCAAGTCTTGAGCATCTACTTGTATATAATAATACCCTTTCTGGAGAACTTCCGGTGGAGATGACAGAGCTCAAGAACCTCAAAAACATCTCCTTGTTTAACAACATGTTCTCTGGAGTCATACCTCAAAGCTTGGGAATTAATAGCACTTTGTTGCAGTTGGACTTTATAAACAACAGGTTCACCGGCAACCTCCCACCAAATCTTTGTTTTCGCAGAAAGTTAAGCGTTTTGAATATGGGCATCAATCAACTTCAAGGTACCATACCTCGTGATGTCGGAAGATGCCCAACTCTAAGAAGGGTCATTCTTAAACAAAACAGCTTTACTGGGCCTCTTCCTGATTTTGAAACTAATACCAATCTCTTATACATGGATATCAGCAACAACAAAATCAACGGATCGATTCCATCAAGTTTAGGAAACTGCACAAATCTCACAGACTTAATTTTGCCTATGAACAAATTTAGTGGGCCAATACCATCAGAGATAGGAAACCTTGTGAACCTTAGGACTTTCGTTCTTGCTCACAACAACTTAGAAGGTCCATTGCCATTTCAGCTGTCAAACTGTACCAAAATGGACAAGTTTGACGTGGGATTTAATTTCTTAAATGGTTCCTTGCCATCAAGTTTGCAAAGATGGACAAGGCTAAACACACTAATTTTGAGAGAGAATCGTTTTAGTGGCGGCATTCCAGCTTTCTTGTCGGCATTTAACGATCTTTCTGAACTACAGCTTGGTGGCAATATGTTTGGAGGGAGGATTCCTAGATCGATTGGGGCATTGCAGAATTTGATCTACGGATTAAATCTAAGTTCTAATGGGCTGATAGGAGACATACCTGTGGAAATTGGAAAACTGAAAACTTTGCAAATGCTGGATCTGTCTCAGAACAATTTGACAGGAAGCATACAAGTTCTTGATGAACTCCCTTCATTGGCTCAAATCAATATTTCATATAATTATTTTCAGGGTCTCATACCAAAGAGTCTAATGACGCTGCTTAATTCTCCCTTGTCATCATTTTTGGGGAATCCTGGGCTATGTATCAGTTGTTCACCATCCGATGGTTTGGTTTGCCCCAAAAGCAGCCATCTAAAACCATGTGATAACAAAACAGTGAAACACAAAGGCCTCGGCAAAACTGCAATTGTAATGATACCTTTAGGATCCTCAATATTTGTTGTTTTTCTGTTGATGGGATTAGTATATATCTTTGTTTATCGCAGAAAATCTAAGCAGCAAGTTCATATATCTGATAATGGTGGTCCTTCGTCCCTTTTTAACAAAGTCCTGAAGGCTACATCAAACCTCAGTGATCAGTATATTATTGGAAGGGGAGCCCATGGAGTTGTTTATAAAGCCCTTGTAAGTCAAGACAAAGCTTTTGCTGTAAAGAAGCTAGCATTTGCTGCCAGCAAAGGTAAGAACATGAGCATGATCAGAGAAATTCAAACCCTTGGACAAGTTAGGCATCGGAATCTTGTCAAATTGGAAGAGTTTTGGTTCGGACAAGATTATGGTCTAATTCTGTACAGATACATGCCAAATGGAAGCCTTTATGATGTATTGCATGAAAAGAAACCAGCACCATCCTTAGAGTGGAATGTCCGATATAAGATAGCTGTTGGAATTGCTCATGGGTTGTCTTATCTCCATTATGACTGTGATCCTCCCATAGTGCACCGAGATATCAAACCGAACAACATACTTTTAGACTCTGATATGGAGCCTCACATTGCTGACTTTGGTATTGCCAAACTTTTGGACCAGTCTTCTACATCAAATCCTTCCTTATCTGTGCCGGGAACAATTGGTTATATTGCGCCAGAGAATGCTTATACAACAACAAGTAGTAGGGAGTGTGACGTGTACAGTTATGGGGTAGTTTTGCTTGAGCTGATAACCAGAAAGAAGGTAGCAGATCCATTATTTATGGAGGGTACTGATATAGTGGGTTGGGTTAGATTGTTGTGGAGTGAAACAGGAGAAATTAACCAAATTGTTGATTCAAGCCTTGTAAATGAATGTCTAGATACCAATATAATGGAAAATGTTACCAAAGTGCTTATGCTGGCTTTGAGATGTACTGAGAAGGATCCACACAAGAGGCCCACAATGACAGATGTTACCAAGCAATTATCAGATTCTAATCCACAGAAAATAAGTATGAAGACCTAG 3249 0.3992 MSLLFFLIFLQHFLYSVCALNSDGLALLSFMSHWTYVPPPINSTWIPSHSTPCSWVGVQCDHTHRVISLNLSSYDIYGQLGPEISNCTQLKHLDLTLNYFTGQIPPSFTNLHKLTYLSLSTNLFTSPFPHFLTQIPHLHLLDLSYNQFTGSIPTSIANMTQLRNLYLQNNNFSGPIPSSIGNCTQLQDLFLNSNQFQGVIPHTLNNNNNLVRFDVAYNKLTGTIPFGGASSSGCQNLLFLDISYNFFSGGGIPSAIGNCTSLSQFVAVRCNLVGTIPSSIGLLTKLSLLSLPENHLTGKIPPEIGNCKSLNQLHLYSNRLDGNIPSELGKLSELQDLELFSNQLSGEIPLGIWKIPSLEHLLVYNNTLSGELPVEMTELKNLKNISLFNNMFSGVIPQSLGINSTLLQLDFINNRFTGNLPPNLCFRRKLSVLNMGINQLQGTIPRDVGRCPTLRRVILKQNSFTGPLPDFETNTNLLYMDISNNKINGSIPSSLGNCTNLTDLILPMNKFSGPIPSEIGNLVNLRTFVLAHNNLEGPLPFQLSNCTKMDKFDVGFNFLNGSLPSSLQRWTRLNTLILRENRFSGGIPAFLSAFNDLSELQLGGNMFGGRIPRSIGALQNLIYGLNLSSNGLIGDIPVEIGKLKTLQMLDLSQNNLTGSIQVLDELPSLAQINISYNYFQGLIPKSLMTLLNSPLSSFLGNPGLCISCSPSDGLVCPKSSHLKPCDNKTVKHKGLGKTAIVMIPLGSSIFVVFLLMGLVYIFVYRRKSKQQVHISDNGGPSSLFNKVLKATSNLSDQYIIGRGAHGVVYKALVSQDKAFAVKKLAFAASKGKNMSMIREIQTLGQVRHRNLVKLEEFWFGQDYGLILYRYMPNGSLYDVLHEKKPAPSLEWNVRYKIAVGIAHGLSYLHYDCDPPIVHRDIKPNNILLDSDMEPHIADFGIAKLLDQSSTSNPSLSVPGTIGYIAPENAYTTTSSRECDVYSYGVVLLELITRKKVADPLFMEGTDIVGWVRLLWSETGEINQIVDSSLVNECLDTNIMENVTKVLMLALRCTEKDPHKRPTMTDVTKQLSDSNPQKISMKT 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04983 1082 SMART serkin_6 794 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04983 1082 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 428 714 - -
Trre11g04983 1082 SUPERFAMILY Protein kinase-like (PK-like) 777 1070 IPR011009 -
Trre11g04983 1082 FunFam Leucine-rich repeat receptor-like kinase 25 133 - -
Trre11g04983 1082 SUPERFAMILY L domain-like 404 722 - -
Trre11g04983 1082 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 311 400 - -
Trre11g04983 1082 MobiDBLite consensus disorder prediction 1058 1082 - -
Trre11g04983 1082 Gene3D Ribonuclease Inhibitor 20 177 IPR032675 -
Trre11g04983 1082 ProSitePatterns Serine/Threonine protein kinases active-site signature. 916 928 IPR008271 GO:0004672|GO:0006468
Trre11g04983 1082 Gene3D Ribonuclease Inhibitor 178 228 IPR032675 -
Trre11g04983 1082 Gene3D Ribonuclease Inhibitor 229 471 IPR032675 -
Trre11g04983 1082 FunFam Leucine-rich repeat receptor protein kinase EMS1 229 310 - -
Trre11g04983 1082 Pfam Leucine rich repeat 625 678 IPR001611 GO:0005515
Trre11g04983 1082 Pfam Leucine rich repeat 113 172 IPR001611 GO:0005515
Trre11g04983 1082 ProSitePatterns Protein kinases ATP-binding region signature. 800 823 IPR017441 GO:0005524
Trre11g04983 1082 Gene3D Ribonuclease Inhibitor 475 710 IPR032675 -
Trre11g04983 1082 ProSiteProfiles Protein kinase domain profile. 794 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04983 1082 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 134 227 - -
Trre11g04983 1082 Gene3D Phosphorylase Kinase; domain 1 764 870 - -
Trre11g04983 1082 Gene3D Transferase(Phosphotransferase) domain 1 871 1081 - -
Trre11g04983 1082 FunFam Serine/threonine-protein kinase-like protein CCR4 871 1082 - -
Trre11g04983 1082 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 6 98 - -
Trre11g04983 1082 SUPERFAMILY RNI-like 68 440 - -
Trre11g04983 1082 Pfam Protein kinase domain 798 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04983 1082 Pfam Leucine rich repeat N-terminal domain 21 61 IPR013210 -
Trre11g04983 1082 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 761 870 - -
Trre11g04983 1082 ProSiteProfiles Leucine-rich repeat profile. 645 667 IPR001611 GO:0005515
Trre11g04983 1082 MobiDBLite consensus disorder prediction 1066 1082 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04983 Trre-Chr11 60421098 60424433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04983 14 1072 Receptor kinase-like Gene Family AT1G73080 51.097 0.0 1019
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre11g04983 Pkinase 5.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04983 - - gmx:100778035 1543.1