Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04977 ATGTGGAAGGGGAGTAGAAAGGGAGGTGGAGGAGGAGGAGGAGGAGGAGGAAATGGATTGGTGGCAGTGGCTATTGACAAAGATAAAGGAAGCCAATACGCTCTCAAATGGGCAGCTGATAATCTTCTCAATAGAGGCCAAACCCTTATTCTAATCCATGTTTCCCTCGTCGCCGGCACCACATCCGCTTCTTCCAGAGGTTGCGAAGCCGCCATTATATGTAACGTCAGCAGTACTTCAGCTGCATCATCTCCACAAAGAAATCAACTTGATAACGCTACCAAGGATCTCTTTCTTACCTTCCATTGCTATTGCACACGCAAAGATATACAATGTCTGGATGTCCTACTTGAAGACACTGATGTTGTCAAAGCAATAACAGAATATGTTTCTCATGCTGCAATTGAGAACTTGGTCATTGGTTCACCGTCAAGGCATGGATTTATTAGGTTTAAGTCATCAAGTACGCCAAGCAGCATATCAAAGGGGGCGCCAGATTTCTGTAATGTTTTTGTCATATCTAAGGGGAAAATCTCATCAGTTCGGAACTCTTCTCGTCCGGCCCCGCATACCTCCCCACTTCTGAGCCATATACATAACAATATAAATAATCAGGATTTAAATCAATCTGCAGATCAGATATGCTCTAGACGTATGAATTTGAGAGACAGGACGTCGATGAAACCTCACGGTTGGCATGATGAATCCACAAACAGATCTCCATTTAGAAGAGGAGGAAGAGGCACGAGTGGAATGTTATGTGTAGACTTCACAGAATCAGACACAGACATATCATTTGTAAGCTCTGGGAGGCCAAGCAGTGCTCGTTCATCCTCTGTTTACGACTACATTGACTCCGGTCGAACTTCACGAGTTTCTACCAGTTCAGATCGCAGCTTTGGATCCAACCGATTGGGAATCAAGTTCACTGAACCCGGTTCCCCAGATACCTCTTTTTCACAAGATACTAGTAGAACATCATTTTCATATTCATCTCAGAACATGGATGAAACAGAAGCTGATATGAGGAGACTGAAGCTTGAGTTAAAACAAACAATGGAAATGTACAATACAGCATGCAGAGAAGCGCTTACAGCACAACACAAGTTAATGGAGATGAGCAACTGGAAAATTGAAGAAGAAAAAAAATTAGAAGAGTCACAACTGTCCCAAGAAGCTGCACTGGCAATAGCCGAGAAAGAGAAAGCAAGAAGTAAGGCAGCCATGGAAACAGCTGCAGCAGCTAGAAAAATAGCAAACGTGGAATCACATAGAAAATCAAGTGTTCCAGTTAAGTCTCTTAAAGAAGCAGAGGACATGAGGAAGCTATTGGATAATTTAGCCCAAACTGATGTAAGATATAGGAGATACAATATTGAGGAGATTGAAGCAGCCACAAACATGTTTTCTGAAAAACTAAAAATTGGGGAAGGTGGTTATGGACCTGTTTATAAATGTTACCTTGATCACACTCCAGTGGCCGTGAAGGTTTTAAGTCCTGATGCGGCTCAAGGGAAATCACAGTTTCAGCAAGAGGTTGACATACTGAGTTGTATGCGCCACCCAAACTTGGTGCTTCTTTTAGGAGCGTGTCCAGAGTATGGTATATTGGTTTATGAATATATGGCGAATGGAAGCTTAGAAGATTGTCTGAATCGAAAAAAGAAGGGTGGTAGGGTTCTGTGTTGGCAGCTGAGGTTTCGGATTGCTGCAGAGATAGCCACGGGCTTGCTATTCCTACATCAGACGAAGCCTGAACCTTTGGTGCACCGTGATTTGAAACCCGGCAACATTTTGCTGGACCAGAATTATGTATGTAAGATTAGTGATGTTGGATTGGCAAGGCTGGTCCCTGTGATGGCTGAAAATGTAACACAGTGTCACATGACATCGGCAGCGGGAACATTCTGTTATATTGATCCCGAGTATCAACAAACAGGAATGCTTGGTGTAAAGTCGGACGTTTATTCTCTGGGGATCATATTTCTACAGTTATTGACTGGAAGACATCCAATGGGATTGGCTCACCATGCTGAACAGTCTATTGAGAATGGCACATTTGAGGAAATGCTTGACCAATCTTTATCGCACTGGCCCATTCAAGAAGCCCTAACCCTTGCAAATATAGCTGTAAATTGTGCACAACTCAGACGAAAAGACCGCCCAGACCTTGCCAAAGTAGTGTTGCCTGAGCTTGTTAAACTCAGAGAGTTTGCTGAAGAAAATATGGGTCCCATCTTTTTAGGAGGAGGCATTACTTTTAGCAGTAGTGGTAGCACTGGACCTTCCCCCAACCACAGTGAAGCTTCTATGCAGCAGGATGTGATGAGCGACCCACAACTTGTAAATTCAGGAAGCTCAATAAGTCCACCAACTTCATCAACTGCAACAGAAGAAAATCCTTAA 2406 0.4335 MWKGSRKGGGGGGGGGGNGLVAVAIDKDKGSQYALKWAADNLLNRGQTLILIHVSLVAGTTSASSRGCEAAIICNVSSTSAASSPQRNQLDNATKDLFLTFHCYCTRKDIQCLDVLLEDTDVVKAITEYVSHAAIENLVIGSPSRHGFIRFKSSSTPSSISKGAPDFCNVFVISKGKISSVRNSSRPAPHTSPLLSHIHNNINNQDLNQSADQICSRRMNLRDRTSMKPHGWHDESTNRSPFRRGGRGTSGMLCVDFTESDTDISFVSSGRPSSARSSSVYDYIDSGRTSRVSTSSDRSFGSNRLGIKFTEPGSPDTSFSQDTSRTSFSYSSQNMDETEADMRRLKLELKQTMEMYNTACREALTAQHKLMEMSNWKIEEEKKLEESQLSQEAALAIAEKEKARSKAAMETAAAARKIANVESHRKSSVPVKSLKEAEDMRKLLDNLAQTDVRYRRYNIEEIEAATNMFSEKLKIGEGGYGPVYKCYLDHTPVAVKVLSPDAAQGKSQFQQEVDILSCMRHPNLVLLLGACPEYGILVYEYMANGSLEDCLNRKKKGGRVLCWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDQNYVCKISDVGLARLVPVMAENVTQCHMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRHPMGLAHHAEQSIENGTFEEMLDQSLSHWPIQEALTLANIAVNCAQLRRKDRPDLAKVVLPELVKLREFAEENMGPIFLGGGITFSSSGSTGPSPNHSEASMQQDVMSDPQLVNSGSSISPPTSSTATEENP 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04977 801 MobiDBLite consensus disorder prediction 755 801 - -
Trre11g04977 801 Gene3D Phosphorylase Kinase; domain 1 447 541 - -
Trre11g04977 801 PANTHER OS02G0152300 PROTEIN 21 787 - -
Trre11g04977 801 MobiDBLite consensus disorder prediction 287 303 - -
Trre11g04977 801 MobiDBLite consensus disorder prediction 313 336 - -
Trre11g04977 801 SMART serkin_6 469 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04977 801 CDD STK_N 20 176 - -
Trre11g04977 801 Pfam Universal stress protein family 21 165 IPR006016 -
Trre11g04977 801 SUPERFAMILY Protein kinase-like (PK-like) 453 728 IPR011009 -
Trre11g04977 801 MobiDBLite consensus disorder prediction 225 248 - -
Trre11g04977 801 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 441 541 - -
Trre11g04977 801 Gene3D HUPs 20 173 IPR014729 -
Trre11g04977 801 ProSiteProfiles Protein kinase domain profile. 469 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04977 801 MobiDBLite consensus disorder prediction 287 339 - -
Trre11g04977 801 Coils Coil 335 362 - -
Trre11g04977 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Trre11g04977 801 Pfam Protein kinase domain 470 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04977 801 MobiDBLite consensus disorder prediction 225 241 - -
Trre11g04977 801 Gene3D Transferase(Phosphotransferase) domain 1 542 743 - -
Trre11g04977 801 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04977 Trre-Chr11 60384138 60388407 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04977 9 780 Receptor kinase-like Gene Family AT1G78940 54.672 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Trre11g04977 Pkinase 4.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04977 - - gmx:100801601 1061.21