Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04957 ATGGAGGAGGAGACTCAGAAGACACAACAGCCCTTTGCCACCTCAATTGCTGCTTTTGCTGCTTTCTCTATCTTTTTCTTCTTCTTCCTCTTCCTATTCCGTAGTCGAAGGAGATTTACTCACAACAAACTTCCCCATGTACCAGTTGTTCCAGGTTTGCCACTGATTGGGAATCTACTTCAATTGAGAGAGAAGAAACCTCACAAGACCTTCACAAAGATGGCTCACAAATATGGACCTATTTATTCCATCAGAGCTGGTGCTTCCACCATCATTGTTCTCAACACTGCTCAACTTGCCAAACAGGCATTGGTGACCAGATTTCCGTCGATTTCAACAAGGAAGCTATCAACTGCACTGACAATTCTGACTTCTGACAAATGTATGGTTGCTATAAGCGACTACAATGATTTTCACAAAATGGTCAAAAAACATATTCTTGCTAATGTCCTTGGAGCCAATGCACAGAAGCGACACCGTCTCCACAGAGAAGTCATGATGGAAAATATGTCCAGGCAGTTTAGTGAACATGCAAAGACCCTCTCTGATTTAGCTGTTGATTTTAGGAAAATATTTGTGTCTGAACTTTTCGGACTAGCACTAAAGCAAGCTCTGGGAAGTGATGTTGAATCCATTTATGTCGAGGAGTTTGCAAGTAGATTATCAAGAGAGGACTTATATAACATTCTAGTGGTTGATTTTATGGAGGGTGCCATTGAGGTGGATTGGCGAGATTTCTTTCCATACTTGAAATGGGTTCCAAATAAGAGCATGGAGAAAAAAATTCATAAAGTGGATCTCAGTCGAAAATATGTCATGAAGGCATTGATTAATGAGCAGAAGAAGCGATTGGCATCAGGAAAGGAAGTAAATTGTTACTACGACTATCTGATATCAGAAGCTAAAGAAGTGACTGAAGAACAAATGATCATGCTTCTCTGGGAGCCAATTATTGAGACATCTGATACTACCTTAGTTACAGCAGAATGGGCAATGTATGAACTTGCCAAAGACAAAAATCGTCAGGACCGTCTGTATAAGGAGCTCCTAAATGTATGTGGACATGAAAAGGTTACAGAAGACCAATTATCTAAGCTACCTTACTTGGGGGCTATATTCCATGAAACATTAAGGAAGCATAGTCCAGTTCCGATTGTCCCACTAAGATATGTTCATGAGGATACCGAATTGGGTGGATATCATATTCCTGCCGGAAGCGAGATCGCAATTAATATATATGGATGTAACATGGATTGCGACTGTTGGGAAAATCCTAACCAGTGGATTCCAGAGAGATTTCTTGACGAGAAATATGAGCCTTCTGATTTGTACAAGACTATGGCCTTTGGAGGAGGGAAGAGGGTGTGTGCAGGCTCTCTTCAGGCCATGTTGATAGCTTGCACGGCAATTGGAAGATTGGTACAGGAATTTGAGTGGGAGCTAGGACAAGGGGAGGAAGAGAATGTGGATACAATGGGTCTTACAACCCACAGGCTTCATCCTCTGCAAGTAAAACTCAAGCCAAGAAACCATTTTAAGTATTAG 1545 0.4142 MEEETQKTQQPFATSIAAFAAFSIFFFFFLFLFRSRRRFTHNKLPHVPVVPGLPLIGNLLQLREKKPHKTFTKMAHKYGPIYSIRAGASTIIVLNTAQLAKQALVTRFPSISTRKLSTALTILTSDKCMVAISDYNDFHKMVKKHILANVLGANAQKRHRLHREVMMENMSRQFSEHAKTLSDLAVDFRKIFVSELFGLALKQALGSDVESIYVEEFASRLSREDLYNILVVDFMEGAIEVDWRDFFPYLKWVPNKSMEKKIHKVDLSRKYVMKALINEQKKRLASGKEVNCYYDYLISEAKEVTEEQMIMLLWEPIIETSDTTLVTAEWAMYELAKDKNRQDRLYKELLNVCGHEKVTEDQLSKLPYLGAIFHETLRKHSPVPIVPLRYVHEDTELGGYHIPAGSEIAINIYGCNMDCDCWENPNQWIPERFLDEKYEPSDLYKTMAFGGGKRVCAGSLQAMLIACTAIGRLVQEFEWELGQGEEENVDTMGLTTHRLHPLQVKLKPRNHFKY 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04957 514 FunFam Ent-kaurene oxidase 2 39 511 - -
Trre11g04957 514 Pfam Cytochrome P450 50 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g04957 514 Gene3D Cytochrome P450 39 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g04957 514 CDD CYP77_89 77 503 - -
Trre11g04957 514 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g04957 514 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g04957 514 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g04957 514 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g04957 514 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g04957 514 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g04957 514 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g04957 514 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 12 510 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Trre11g04957 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Trre11g04957 514 SUPERFAMILY Cytochrome P450 38 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04957 Trre-Chr11 60272218 60274761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04957 35 509 Cytochrome P450 AT5G25900 62.683 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04957 K04122 - gmx:100802970 770.77