Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre11g04935 | ATGGCTGTATCAGGTTCTTCTGGTTCTGGGCAGCCACAATTCATTTCAAGCACTGGAAACCAAAACTCTTCCAATGCGCCGCTCATTGACAGTGACACCACAAATACTGATCAAATTGTTGTCCCTGATAGGACAAGCTGGAAAAACTTATTTGCATATATGGGGCCTGGATTTCTTGTTTCCATTGCATATATAGACCCAGGAAACTTTGAGACGGATCTACAATCTGGGGCACAATATAGATATGAGTTACTCTGGATCATATTGGTGGCATCTTGTGCTGCTCTTGTAATTCAATCGATGGCAGCCAATCTTGGGGTGGTCACCGGAAAGCACTTAGCAGAGCATTGTAGAGCTGAATATTCGCGGGTGTCCAACTTTATTCTTTGGATTATTGCTGAAATTGCCATAGTGGCCTGTGACATCCCAGAAGTGATCGGGACAGCCTTTGCGTTAAATATGCTCTTCAACATACCTGTTTGGATTGGTGTGCTACTGACCGGACTCAGCACATTGATGCTCCTAGCATTACAACAATATGGGGTTAGGAAACTTGAATTCTTGATTGCATTTCTTGTGTTTACTATTGCTGCGTGTTTTTGGGCTGAGCTTGGATATGCAAAGCCTGATGCTAAAGAAGTTGTGAAGGGTCTTTTTGTGCCACAACTTAAAGGGAGTGGTGCTACTGGCCTTGCAATTTCACTCCTCGGTGCTATGGTTATGCCGCACAATCTCTTCCTGCACTCGGCACTGGTACTCTCTAGGAAAATACCACGATCAGTTCGTGGAATCAAAGAGGCTTGCAGATTTTACATGCTAGAAAGTGCCTTTGCTCTTATGGTGGCTTTCCTCATTAATGTTTCTGTCATTTCTGTAAGTGGCGCTGTTTGCAGTTCTTCAAATTTGAATGAAGAAGATCAGATGAGCTGTCAGGATTTAGATCTCAACAAAGCTTCCTTCCTACTTAGAAATGTCTTGGGGAAATGGAGTTCAAAACTGTTTGGAGTTGCTTTACTTGCATCAGGTCAAAGTTCTACGATAACAGGAACCTATGCAGGGCAGTATGTCATGCAGGGATTTCTTGATTTACGATTGACACCATGGATTCGGAATATGTTAACTCGTTGCTTAGCCATAGTTCCTAGTTTGATTGTTGCGGTCATCGGTGGCTCTACTGGGGCTGGGAAGCTCATAATAATTGCATCTATGATCTTATCATTTGAGCTTCCCTTTGCTTTGGTACCACTCCTGAAGTTCACCAGTAGCAAAACCAAGATGGGGGCACATGTTAACTCTACCATGATATCTGCCGTTACTTGGATAATCGGTTCACTTATTATGGTTATTAATATATACTACTTAGTGAATGGTTTCATCAAGCTTCTTCTTCATAGTGATATAGAAATTGTGGCAAAGGTGTTTCTTGGGATATTAGGATTTTCAGGCATGGCAGTATATTTGGCTGGTATAGCTTATCTTGTACTTCGCAAAAATAAAGAGGGTACACATCTTTTGGCTCTAACAGCACCTGAAAATCAGCAAATGGCAAATGAACAAGTAAATGGGTCAATCTATTGTCTTCCAAGAGAAGACATAGTAAACATGCAATTGCCTCAGAGAAGTAGTCCTGCAGATCTTGACTGA | 1644 | 0.4197 | MAVSGSSGSGQPQFISSTGNQNSSNAPLIDSDTTNTDQIVVPDRTSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYRYELLWIILVASCAALVIQSMAANLGVVTGKHLAEHCRAEYSRVSNFILWIIAEIAIVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLSTLMLLALQQYGVRKLEFLIAFLVFTIAACFWAELGYAKPDAKEVVKGLFVPQLKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYMLESAFALMVAFLINVSVISVSGAVCSSSNLNEEDQMSCQDLDLNKASFLLRNVLGKWSSKLFGVALLASGQSSTITGTYAGQYVMQGFLDLRLTPWIRNMLTRCLAIVPSLIVAVIGGSTGAGKLIIIASMILSFELPFALVPLLKFTSSKTKMGAHVNSTMISAVTWIIGSLIMVINIYYLVNGFIKLLLHSDIEIVAKVFLGILGFSGMAVYLAGIAYLVLRKNKEGTHLLALTAPENQQMANEQVNGSIYCLPREDIVNMQLPQRSSPADLD | 547 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre11g04935 | 547 | PRINTS | Natural resistance-associated macrophage protein signature | 182 | 203 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Trre11g04935 | 547 | PRINTS | Natural resistance-associated macrophage protein signature | 370 | 387 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Trre11g04935 | 547 | PRINTS | Natural resistance-associated macrophage protein signature | 402 | 421 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Trre11g04935 | 547 | PRINTS | Natural resistance-associated macrophage protein signature | 232 | 255 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Trre11g04935 | 547 | PRINTS | Natural resistance-associated macrophage protein signature | 157 | 176 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Trre11g04935 | 547 | PRINTS | Natural resistance-associated macrophage protein signature | 129 | 155 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Trre11g04935 | 547 | PRINTS | Natural resistance-associated macrophage protein signature | 342 | 361 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Trre11g04935 | 547 | NCBIfam | metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family | 49 | 426 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Trre11g04935 | 547 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Trre11g04935 | 547 | Hamap | Divalent metal cation transporter MntH [mntH]. | 42 | 458 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Trre11g04935 | 547 | Pfam | Natural resistance-associated macrophage protein | 70 | 432 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Trre11g04935 | 547 | NCBIfam | Nramp family divalent metal transporter | 55 | 423 | - | - | |
Trre11g04935 | 547 | PANTHER | SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER | 25 | 501 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre11g04935 | Trre-Chr11 | 60095623 | 60099942 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre11g04935 | 16 | 540 | Inorganic Solute Cotransporters | AT1G15960 | 79.317 | 0.0 | 855 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre11g04935 | K21398 | - | gmx:100797298 | 950.273 |