Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04909 ATGGCGAAACTGGTTCTGAAAGCTGGTAGCAGACCTCCATGGGTGGGACTAGCTGCTGCAGTTTGGATCCAAATAGCTGCTGGAAATGCCTACAACTTCCCTCTATACTCCTCTGCTCTCAAATCTGTGTTGGGTCTCAATCAACAACAAGTGACTATTCTTGGAGTAGCCAATGATGTTGGAGAGAATTTTGGTCTTCTACCTGGTATTACCTGCAACAAATTCCCTCCTTGGGCTTTGCTTCTTGTTGGTTCTGTCCTTTGTTTCTTTGGTTATGGTGTTATCTGGCTTGCTGTTAGCCAAACTGTTTCCAATTTGCCCTATGTTCTGGTATGGCTCGCACTTTGTGTTGCCACGAACAGCAGTGCATGGTTTGGCACGGCCGTGCTTGTTACCAACATGAGAAACTTTCCACTCAGTAGAGGCACAATTTCTGGCATTCTCAAAGGTTATGTAGGGATAAGTGCTTCAGTATATACATTAATATATAGCATATTGCTGAAAGGTTCCGCTTCAAAATTACTTTTGTTTCTAGCAATTGGAGTTTCTATTGTGTGCTTAATTTTGATGTACTTCATTAGGCCTTGTACTCCTCCTTCTGGTGAAGACTCTTCAGTGCATGTCCATTTTATTTTCACACAAGCTTCGAGTATTTTACTCGCCACATATCTTGTTACGGCAACGATACTAAGTGACATGGTTTCGATTAATGATGTTGTTTCGTGCATCTTAGTTGCAATAATGATTATACTTATGATAACTCCCCTTGCAATTCCTTTGAAAATGACTCTATTTCCTGCAAGTCAAAAAAACAATGTTCCAATAGTTGGTTCTTCTGATCAATTAGCATCAGGTGGTAATGTTTCAACTTCAACACAAACAAGTCCGTTGCTTGAAAGTTTTCATGAAGTTGAGGATGCTTCTTCAGATACTGAGATCCTAATTGCAGAAGGGGAGGGTGCAATTAGGAAGAAAAGGAAACCAAAAAGGGGAGATGATTTTAAGTTCAAAGAAGTTTTAGTTAAGGCTGATTTTTGGTTACTTTGGTTTGCTTATTCATTAGGAGTTGGCTCAGGTGTAACTGTTCTCAATAATTTGGCTCAAATTGGAGTTGCTTCGGGTGTTGAAGACGCAACCATATTGCTTTCGGTCTTCAGCTTTTGCAATTTTATCGGTCGACTAGGTGCCGGTGCTGTCTCTGAACACTTTGTCAGGTTGAAAACACTACCTAGAACAATTTGGATGACAAGTACACAAGTTATTATGATCATAGCATTTTTGCTTTATGCTTCAGCTCTAGATGGAACTCTTTATGCTGCAACAGCTTTGCTTGGAATGTGCTATGGAGTTCAGTATTCTATAATGATCCCAACTGTCTCCGAGCTATTTGGTTTGAAGCACTTTGGCGTAATTAGTAGCTTCATGATGCTAGGAAATCCAATTGGTGCACTTTTATTTTCTGTTTTTCTAGCTGGTAATTTGTATGATACAGAAGCTGCAAAACAAGGAAACTCCACATGCTATGGTGCAAATTGTTTCAGGATCACTTTTCTGGTTTTGGCTGGTGTCTGTGGAATTGGTGCCATTTTGAGTATAATTTTGACAGTTAGATTAAGACCGGTATATCAAATGTTGTACGCTAGCGGGTCATTTCGATTGTCTCATACTTCAAATCAATGA 1680 0.3982 MAKLVLKAGSRPPWVGLAAAVWIQIAAGNAYNFPLYSSALKSVLGLNQQQVTILGVANDVGENFGLLPGITCNKFPPWALLLVGSVLCFFGYGVIWLAVSQTVSNLPYVLVWLALCVATNSSAWFGTAVLVTNMRNFPLSRGTISGILKGYVGISASVYTLIYSILLKGSASKLLLFLAIGVSIVCLILMYFIRPCTPPSGEDSSVHVHFIFTQASSILLATYLVTATILSDMVSINDVVSCILVAIMIILMITPLAIPLKMTLFPASQKNNVPIVGSSDQLASGGNVSTSTQTSPLLESFHEVEDASSDTEILIAEGEGAIRKKRKPKRGDDFKFKEVLVKADFWLLWFAYSLGVGSGVTVLNNLAQIGVASGVEDATILLSVFSFCNFIGRLGAGAVSEHFVRLKTLPRTIWMTSTQVIMIIAFLLYASALDGTLYAATALLGMCYGVQYSIMIPTVSELFGLKHFGVISSFMMLGNPIGALLFSVFLAGNLYDTEAAKQGNSTCYGANCFRITFLVLAGVCGIGAILSIILTVRLRPVYQMLYASGSFRLSHTSNQ 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04909 559 CDD MFS_Mch1p_like 12 528 - -
Trre11g04909 559 Pfam Nodulin-like 13 260 IPR010658 -
Trre11g04909 559 SUPERFAMILY MFS general substrate transporter 10 198 IPR036259 -
Trre11g04909 559 SUPERFAMILY MFS general substrate transporter 321 540 IPR036259 -
Trre11g04909 559 Gene3D MFS general substrate transporter like domains 342 542 IPR036259 -
Trre11g04909 559 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04909 Trre-Chr11 59933334 59935787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04909 1 558 Nodulin-like Gene Family AT1G80530 59.364 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04909 - - psat:127087605 960.288