Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04906 ATGTCTCATAGGAATAATGATTCTAATTATACTTCAATACCTGTTAGCTCATCATATCTAGAATTACAACCTCATCATCATTCATCAAATTCTTTTCAAAGGTTGTCTTTTGATGATGGTGGTGGGTTTTTGGGATCTAAGGTTGTTGTTAATGATAATGATGACGATGATGATGATGATGATGATGTTGATTTAGAAATTGATATTGATAATTATCCTCTTGTTATTGGGCCTAATCCCAATTATGGTTCTGGTGTACCTGGTGCTGTGTTCAATTTGACTACTACTATTATTGGGGCAGGACTTATGGCTCTTCCTGCTACAATGAAAGTTCTTGGTGTGGTTGTTGGGATTGTGTTGATTATTTTGATGGGGATTTTGTCTGAAATTAGTGTCGAATTGTTGGTTCGTTTTTCTGTTTTGTGTAAAGCATCTTCTTATGGTGAGGTTGTTCAAGAAGCTATGGGAAGACCTGCTAGGATTTTGTCTGAAATTTGTATTATTTTGAATAATGCCGGTGTTTTGGTGGTTTATTTGATTATAATGGGTGATGTTATGTCCGGTTCGGTTCATCATTTGGGGGTTTTTGATCAGTTAATGGGGAATGGGGTTTGGGATCAGAGGAAGATTGTGATTCTTGTTGTTATGGTGGTTTTTCTTGCACCTCTTTGTTCACTTGATAAGATTGATTCGTTGAGTTTGACTTCAGCTGCGTCGGTCGCTCTTGCTGTCATGTTTGTCGTCGTTACATTCACTGTTGCATCTATTAAGCTTGCTGAAGGAAAGATTGATGCTCCTAGGATGGTTCCTGATTTTAGCTCGAAAAAGGCTATCTTGGATTTGCTTGTGGTGATTCCAATCATGACAAATGCATATGTTTGTCATTTTAATGTGCAGCCGATATACAACGAGCTTGAAGGTAGATCACCGCAGAAGATGAACCGAGTAGGAAGGTTCACCACAATTTTGTGCATCCTGGTTTATGCTGCAACAGCGCTGTCCGGTTACCTATTATTTGGGGAAGATACTGAGTCTGATGTCCTGACTAATTTTGATAAGGATCTTGGAATTCGGTTTAGTTCGGCCTTGAACTATATCGTTAGAGTTGGCTATGTTCTCCATTTGATACTTGTCTTCCCCGTTATTCATTTCTCGCTACGCCAAACAGTGGATACCTTGGTGTTTGAAGGATCGCCTCCTTTGGCAGAAAGTAGGAAGAGATCATTAGGGCTGACTGCGATTCTGTTGGTCCTCATATATATTGGTTGTACCATGATACCAAACATTTGGACAGCTTTTAAGTTCACTGGTGCAACAACGGCAGTTTCGTTAGGTTTCATATTCCCACCTCTTGTTGCAATTAGATTAAGTCATAAATGGGATTTGAGCTATGTAGAATGGTTTTTATCATGGTTAATGTTGGTATTGGCTGTGACTGTTAGCATTGTAGGAGTCATTGGCAATGTCTATAGCCTCGAGAGTAAGTCTTAG 1491 0.3917 MSHRNNDSNYTSIPVSSSYLELQPHHHSSNSFQRLSFDDGGGFLGSKVVVNDNDDDDDDDDDVDLEIDIDNYPLVIGPNPNYGSGVPGAVFNLTTTIIGAGLMALPATMKVLGVVVGIVLIILMGILSEISVELLVRFSVLCKASSYGEVVQEAMGRPARILSEICIILNNAGVLVVYLIIMGDVMSGSVHHLGVFDQLMGNGVWDQRKIVILVVMVVFLAPLCSLDKIDSLSLTSAASVALAVMFVVVTFTVASIKLAEGKIDAPRMVPDFSSKKAILDLLVVIPIMTNAYVCHFNVQPIYNELEGRSPQKMNRVGRFTTILCILVYAATALSGYLLFGEDTESDVLTNFDKDLGIRFSSALNYIVRVGYVLHLILVFPVIHFSLRQTVDTLVFEGSPPLAESRKRSLGLTAILLVLIYIGCTMIPNIWTAFKFTGATTAVSLGFIFPPLVAIRLSHKWDLSYVEWFLSWLMLVLAVTVSIVGVIGNVYSLESKS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04906 496 PANTHER AMINO ACID TRANSPORTER 82 480 - -
Trre11g04906 496 Pfam Transmembrane amino acid transporter protein 85 487 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04906 Trre-Chr11 59907739 59909229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04906 7 496 Amino Acid or Auxin Permease AAAP Family AT1G80510 71.660 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04906 - - gmx:100791860 771.926