Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04814 ATGGAGAGTGTAAAAGTACCTTTCAATGGTATTGTAACCGATTTTAGGGGAAGAGCATTGCACTATAAAGATGATTGGATTTCTGGTCTCACTTCAGGAATAGGGATATTGGCACCAACTACATATATTTTCTTTGCTTCTGCTTTACCGGTTATTGCTTTCGGCGCGCAACTTAGTAGGGACACAGATGGAAGCTTGAGTACTGTAGAAACATTGGCTTCTACAGCCATTTGTGGAATCATACACTCCATTTTTGGTGGACAACCTCTGCTAGTACTAGGAGTGGCAGAACCTACTATCCTTATGTACACCTATTTGTACAATTATGCCAAAAATAAGGAAGGATTAGGGAGAGAACTCTTTTTGGCTTGGGTAGGATGGGTTTGTGTATGGACTGCTCTATTGCTTTTTCTTTTAGCAATATTCAATGCTGCCGTTATCATCAATAGATTTACAAGGATTGCCGGTGAGCTTTTTGGCATGTTGATCACAGTCTTGTTCATTCAAGAGGCAATCAAGGGAATGGTAACTGAGTTTCAAGTTCCTAAAGAGAGTGATCCAAAATTGGATAAGTTCCAATTTCATTGGCTCTATGCAAATGGATTGCTTGGTGTTATATTCACCTTTGGCCTTCTCTATACTTCTCTAAAAAGCAGAAGAGCAAGATCATGGTTATATGGAACAGAATGGTTAAGAAGTTTCATAGCAGATTATGGAGTACCATTCATGGTAGTTATGTGGACAATTTTATCATTCACAGTAGTAACAAGTAAAGTTCCTTCGGGAGTTCCGAGAAGGCTCATTGCACCTTTGGCTTGGGAATCTACATCATTACATCACTGGACAGTAATCAAAGATATGGGGAAGGTTTCTCCAACACACATTTTTGAGGCTTTTATTCCTGCCATAATGATAGCAGGACTTTACTTCTTTGACCATAGTGTTGCATCCCAAATGGCACAACAAAAGGAATTCAATCTCAAGAAACCTTCTGCATATCACTATGACATATTGTTGCTAGGATTCATGACTTTGCTTTGTGGACTAATTGGCCTGCCTCCTTCAAATGGAGTTCTACCTCAATCCCCTATGCACACCAAGAGTCTGGCTGTTCTCAAGAAACAGTTGATCCGACGAAAGATGGTTAAAAGCGCAAAGGAAAGCATAAGGCTGAAAGCTAGCAATTCTGAAATATATGGAAAGATGCAAGAAGTGTTTATAGAAATGGATAATAATCCTAATAATCATTTAGTGGTAAAAGAACTAGAGGATTTGAAAGATATTGTTCTAAATGGTGAAGATAATGGAGACAACAATAAGAACACATTTGATCCTGAGAAACACATTGATACATATTTGCCTGTAAGAGTAAAAGAGCAAAGAGTGAGCAACCTTTTACAATCACTCTTTGTAGGAGGAGCAGTGCTTGCTATGCCTGCCATAAAAATGATACCAACTTCAGTCTTGTGGGGATACTTTGCTTACATGGCTATTGATAGTCTTCCAGGAAATCAATTCTGGGAAAGGATATTGCTTCTCTTTGTAAGGCCTAGTAGGTGGTACAAGTTGTTGGAAGGTGATCATGCTTCCTTTGTTGAGTCAGTACCTTTCAGATACATAGTCTTGTTTACAGTCTTCCAATGTGTGTATTTCTTGATTTGTTTTGGAGTGACATGGATTCCCATTGCTGGAATGTTGTTCCCTTTGCCTTTCTTTTTGTTGATCACATTGAGACAACATATACTCCCCAAGATATTCAGTCCAAACCATCTTAGGGAACTAGATGCAGCTGAATATGAAGAAATACCTGGTGCTCCAAGACTAAGTTTCAATCTATCCTTCAAGGAGGAGGTTGAATCACCTGAAAGTGTATCAAAGGAAATAGGTAATGCTGAAATGTTAGATGAGTTAACCACTAATAGAGGAGAGTTGAAGGTTAGAACTATTAACTCTACTGAGGAAAGAAATTATCAGGTTTATCCTGATGAAATTGATTCACACTCAGAAAGAGATACTTTGCAGTGA 2025 0.3857 MESVKVPFNGIVTDFRGRALHYKDDWISGLTSGIGILAPTTYIFFASALPVIAFGAQLSRDTDGSLSTVETLASTAICGIIHSIFGGQPLLVLGVAEPTILMYTYLYNYAKNKEGLGRELFLAWVGWVCVWTALLLFLLAIFNAAVIINRFTRIAGELFGMLITVLFIQEAIKGMVTEFQVPKESDPKLDKFQFHWLYANGLLGVIFTFGLLYTSLKSRRARSWLYGTEWLRSFIADYGVPFMVVMWTILSFTVVTSKVPSGVPRRLIAPLAWESTSLHHWTVIKDMGKVSPTHIFEAFIPAIMIAGLYFFDHSVASQMAQQKEFNLKKPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKKQLIRRKMVKSAKESIRLKASNSEIYGKMQEVFIEMDNNPNNHLVVKELEDLKDIVLNGEDNGDNNKNTFDPEKHIDTYLPVRVKEQRVSNLLQSLFVGGAVLAMPAIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVRPSRWYKLLEGDHASFVESVPFRYIVLFTVFQCVYFLICFGVTWIPIAGMLFPLPFFLLITLRQHILPKIFSPNHLRELDAAEYEEIPGAPRLSFNLSFKEEVESPESVSKEIGNAEMLDELTTNRGELKVRTINSTEERNYQVYPDEIDSHSERDTLQ 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04814 674 Pfam HCO3- transporter family 455 545 IPR011531 GO:0006820|GO:0016020
Trre11g04814 674 Pfam HCO3- transporter family 200 375 IPR011531 GO:0006820|GO:0016020
Trre11g04814 674 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Trre11g04814 674 Gene3D Helical hairpin bin 18 60 - -
Trre11g04814 674 PANTHER ANION EXCHANGE PROTEIN 5 603 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04814 Trre-Chr11 59311519 59315480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04814 1 671 Antiporters AT1G74810 68.639 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04814 K24194 - gmx:100811184 1127.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05263 5 53644090 53649390 Trre11g04814 11 59311519 59315480 ECH
Trre11g04814 11 59311519 59315480 Trre11g04814 11 59311519 59315480 ECH