LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre11g04784	ATGGATGCTACTTCTTTGGAATCAAATAGCACCATCCAAACCGAACAACATCCTTTGCTGATGGAGCATCCAGAGAGCGGTAATGGACATCACCACATAATTGATGTTACAAGGAATGATGAAACTTTGTCTACATCATCTCATAATGATCAACACTCGGAAACACATTTACCGGTGATTGATAATCAACCGGCTGAGGGTACTGATGACTCCACTCATCAAACATTTTCATCTTCTGCATCTAGATTAGACTCTACATATTCCGCTCCATTGAGAAGTCGTGAGGGGTATGGTCGTCGCAGAACAAATCCATTGAACTCTGGACTGTGGATTTCTGTTGAGCTTGTTGTCACTGTGATTCAAATCATAGCATCTATTGTGGTTTTGTTGTTGTCGAGAAACGAAAAACCCCAAGCCCCACTGTTTGTGTGGGTTGTAGGTTATGCATCTGGGTGTATTGCCACACTTCCTATTCTTCATTGGCGTTTTCGAAACCGTAATCAAAGAACTGAACAACATACCTCTCAGCCATCTCAAGAAACTTCTGGAAGTAATCGTCTAGATCATTCTGAAACCACCATCTATGTTTCTCATGTTTCTGATGAGGAGAATGGTCATGCTACACAATCAGCTACAGGAAACACTATAATTCCTAGTGTCTTTACTTCTAGTCTTAATGGATTAGTAGACCATTTCAAGATGGCCTTGGATTGCTTCTTTGCAGTTTGGTTTGTAGTAGGAATTGTTTGGATCTTTGGAGGTAACACCTCTTCTTCTGAGGCTCCACAATTATACAGGTTATGTATTGTGTTTCTTACTTTTAGCTGTATTGGATATGTTATGCCATTTATACTTTGTGCAACTATATGTTGCTGCCTACCTTGCATAATTTCTGCTTTGGATATTCGGGAGGATTTATCTCAAAATAGAGGAGCAACAGTAGAATCGATCAATTCTCTACCAGTCTACAAGTTCAAAATGAAGAACAATGAAAATGGTGTTGATCAGTATACCAACACAGCTTTAGAAGAATGCGGGGTTTTGGCTGCAGGGACAGAAAAAGAGCGAATACTCTCAGGAAAAGATGCTATAATGATGAACTTAGAGAGTTACCTTGCTCGCACGTATTTCATGTCCGATGTGTTGACAAATGGTTAA	1158	0.399	MDATSLESNSTIQTEQHPLLMEHPESGNGHHHIIDVTRNDETLSTSSHNDQHSETHLPVIDNQPAEGTDDSTHQTFSSSASRLDSTYSAPLRSREGYGRRRTNPLNSGLWISVELVVTVIQIIASIVVLLLSRNEKPQAPLFVWVVGYASGCIATLPILHWRFRNRNQRTEQHTSQPSQETSGSNRLDHSETTIYVSHVSDEENGHATQSATGNTIIPSVFTSSLNGLVDHFKMALDCFFAVWFVVGIVWIFGGNTSSSEAPQLYRLCIVFLTFSCIGYVMPFILCATICCCLPCIISALDIREDLSQNRGATVESINSLPVYKFKMKNNENGVDQYTNTALEECGVLAAGTEKERILSGKDAIMMNLESYLARTYFMSDVLTNG	385

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre11g04784	385	MobiDBLite	consensus disorder prediction	42	87	-	-
	Trre11g04784	385	MobiDBLite	consensus disorder prediction	42	58	-	-
	Trre11g04784	385	PANTHER	C3H4 TYPE ZINC FINGER PROTEIN	21	365	-	-
	Trre11g04784	385	MobiDBLite	consensus disorder prediction	65	87	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre11g04784	Trre-Chr11	59109790	59111583	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre11g04784	1	363	C3H Transcription Factor Family	AT1G80400	50.134	3.56e-119	350

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre11g04784	-		-	gmx:100819516	560.836