Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre11g04771 | ATGAGTCGCGGTGGTGTTACCGGAGCTAAGGGAAAGAAGAAGACTGCAACCTTCACCATTGACTGTGCTAAACCAGTTGAAGACAAGATCATGGACATTGCTTCTCTTGAGAAGTTTCTTCAAGAGAGAATTAAGGTCGGTGGCAAAGCCGGTGCTCTTGGTGATTCAGTCACCGTTACCAGAGACAAGTCCAAGATCACTGTTACATCTGACAGTAACTTTTCCAAGAGATATTTGAAGTATTTGACAAAGAAATACTTGAAGAAACACAATGTAAGAGACTGGCTCAGAGTGATTGCTTCAAACAAAGATAGGACTGTCTATGAGTTGAGGTACTTCAACATTGCCGAGAACGAGGGAGAGGAAGATTAA | 372 | 0.4247 | MSRGGVTGAKGKKKTATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRTVYELRYFNIAENEGEED | 123 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre11g04771 | 123 | FunFam | 60S ribosomal protein L22-2 | 5 | 123 | - | - | |
Trre11g04771 | 123 | Gene3D | - | 6 | 123 | IPR038526 | - | |
Trre11g04771 | 123 | Pfam | Ribosomal L22e protein family | 13 | 122 | IPR002671 | GO:0003735|GO:0005840|GO:0006412 | |
Trre11g04771 | 123 | PANTHER | 60S RIBOSOMAL PROTEIN L22 | 6 | 122 | IPR002671 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre11g04771 | Trre-Chr11 | 58977467 | 58978221 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre11g04771 | 1 | 123 | Cytoplasmic Ribosomal Protein Gene Family | AT3G05560 | 85.366 | 1.98e-65 | 192 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre11g04771 | K02891 | - | csav:115723248 | 212.616 |