Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04764 ATGCCTAAGAAGCTTCAAAAAACCCTTCAAGATTACCTCAACAAAATCAAAAACAAAAAACCTCATCCTCAAATTACACTAACAAAAATGCTCTCTGGTTGCAAACATCCCAAAACGCCATCGTTTTCTTTAGATAACGGCAGAAACATATCATCATCTAACGCCGTTAACAACAAAATCAACGATGCAGCAACACTAGCTGACGTTGACCGTTTTCTTTTTGAGAATTTTAAGTCTCTTTATTTCAAAGATGATGAAGAAACTGAAAACAACAACAACAATAACAATAACAAAAGAATCTCGGACGGACATAATAACCAGGAACAGCTGAAACTTGGTTCCTGGTTGTTTGAATCGCCGAGATTCATTTCAACACCACCACAAGATCTTTGTGGATCAACACGATTTTTCGTGAAACCAGGAAATTCAGGATCATTGATGGAAGATGTTCTATCTTTAACAAACAGTGATGAAGCTGATTCGAGTAATTCGAATTCATCATCATCTGCATCACCTACAAAAGAGGTTATGATGGTTAATAATCATCATGATCATGATCATAATAATGCTCTTCCTGATAACTGTGTTGCTTTGTTATCGTATTCGCCTAGTCCTTACGATGATTTTAGGCGATCGATGCAAGAATTGGTTGAATCGAAGTATGGTAAACTCGAAAACAATCATAGAAAAATTGATTGGGATTTCATGGAGGAGATTTTGTTTTGTTACCTTAATATTAATGAGAAAAAGTCTCATAAGTTTATTTTAAGTGCTTTTGTTGATCTCATCACTGTTATGCGTCGGAATTCAGAGGCAGCTCCTGGGAAACCGTGTAGCGTCCGAACCGTTAGGATTGGTAGGGAAGTCAGGAAGAAGAAGACCAAGCAAGTTACCATAGAATTTGAGTCTTCTTAA 915 0.3672 MPKKLQKTLQDYLNKIKNKKPHPQITLTKMLSGCKHPKTPSFSLDNGRNISSSNAVNNKINDAATLADVDRFLFENFKSLYFKDDEETENNNNNNNNKRISDGHNNQEQLKLGSWLFESPRFISTPPQDLCGSTRFFVKPGNSGSLMEDVLSLTNSDEADSSNSNSSSSASPTKEVMMVNNHHDHDHNNALPDNCVALLSYSPSPYDDFRRSMQELVESKYGKLENNHRKIDWDFMEEILFCYLNINEKKSHKFILSAFVDLITVMRRNSEAAPGKPCSVRTVRIGREVRKKKTKQVTIEFESS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04764 304 ProSiteProfiles OVATE domain profile. 198 265 IPR006458 -
Trre11g04764 304 NCBIfam uncharacterized plant-specific domain TIGR01568 196 265 IPR006458 -
Trre11g04764 304 MobiDBLite consensus disorder prediction 85 104 - -
Trre11g04764 304 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 57 266 IPR038933 GO:0045892
Trre11g04764 304 Pfam Transcriptional repressor, ovate 202 264 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04764 Trre-Chr11 58945234 58946148 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre11g04764 Ovate 2.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04764 - - lja:Lj3g3v0160750.1 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04764 11 58945234 58946148 Trre11g04764 11 58945234 58946148 ECH
Trre11g04764 11 58945234 58946148 Trre7g00295 7 1975256 1976158 PCT