Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04755 ATGAACGGTGGAGGGAGACAAGGACTTAGATCTAGTGGTGCTACCGGCGTTCACCACCAACGACAATACTCCGAGAATTTTCTCGACGGCGCCACCACCGGTAACAGATGGCTTCAATCTGCTGGTCTTCAACATCTTCAATCCTCCGCCGCCAATCCACTTCAGGATTATAATTTGTACGGCGGTGGAGCGCAGGGAGGGAGAATGTATAGGAATGCTCAGAGAAGCTATAACGGTGGAGGAAGTGATTATTATATGGAACCTGCATCGCCTCCTGATGCTTTCCGTGCTTCGAATTTGAAGATGAACGGTGAAGATTCCACCGGTGATTTTAGTCCTGGCTTGTTGGATCTGCATTCATTTGATACTGAACTTCTTCCTGAGATCCCAGCCTCCAATCCGTATGAGTCGAACTCCTTGTATCGTGTTAGAAGTTTTGATGACACTGAACCTTACATGATGAGCAAACAGACTGCCAAAGCTCGTGCTCCTGATAATGCATTGAAAACTTTACCTGCTGAGAAAGACAAGACTAGTTCTGTGGCAAAGATTAAAGTTGTGGTTCGTAAGAGACCTTTGAATAAGAAGGAATTGGCAAAGAATGAGGAAGACATTATAGAAACATATGCCAATTCTTTAACAGTGCACGAAACTAAACTGAAGGTTGACTTAACTCAATACTTAGAGAAGCATGAATTTGTTTTTGATGCTGTCTTGAATGAAGAGGTCACAAATGATGAGGTGTATCGTGAAACAGTTGAACCCATAGTTCCAATCATCTTTGAACGCACTAAGGCAACTTGCTTTGCATACGGGCAAACAGGAAGTGGAAAAACATATACCATGAAACCACTGCCACTTAAAGCATCAAGGGACATCCTAAGATTGATGCATCATACTTATCGGAACCAAGGATTTCAATTATTCGTGAGTTTCTTTGAAATATATGGAGGGAAGCTTTATGATCTCCTTAATGATAGAAAAAAGCTTTGCATGAGGGAAGATGGTAGCAAGCAAGTTTGCATTGTTGGTTTGCAAGAATACCGCGTAGCGGATGTAGAGAACATCAAAGACCTGATTGAGAAAGGAAGTGCAACAAGAAGTACAGGAACCACAGGTGCCAATGAGGAATCTTCACGGTCTCATGCAATACTTCAACTTGCTATCAAGAGGTCAGTTGATGGCAATGAATCGAAACCTCCCCGGCTTGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCGGATACCACTGACAATGACAAACAGACAAGAATAGAAGGCGCTGAAATAAATAAGAGCTTACTTGCCCTAAAGGAATGCATTAGAGCTCTTGATAACGACCAAGGACACATCCCTTTCAGGGGAAGTAAACTGACTGAAGTTTTGAGAGATTCCTTTGTTGGGAATTCCCGTACTGTTATGATATCATGCATATCACCAAGCTCTGGTTCATGTGAGCACACTTTGAATACATTAAGATATGCTGACAGGGTGAAAAGCCTGTCAAAAGGGAACAACTCGAAGAAGGATGTTTTATCATCAAATTTCAACCTTAAAGAATCAATTACAGTTCCCTTATCTTCTGTTACTGCACCGGCCTATGAGGATTCCACAGCTGATGCATGGCGTGATGAAAATGAAGGGGATGATTTGAGCCCCCCCGAAGAGTACTATGAGCAAGTGAAACCACCGTTGAAGAAAAATGTAAGGATGGAGTCATATGCTATGACTGATGACAAATTGAAGAAACCTAGTGGTCTAGTCAAATGGAAGGACCTCCCAAAACCTGAACCTAAACCCACTAATTCAGAGGATGATTTAAGTGCCCTCTTACAGGAAGAAGAGGATCTTGTAAATGCTCACCGGACACAAGTAGAGGAGACCATGAATATTGTTAGAGAGGAGATGAACCTCTTGGTTGAAGCAGATCAACCAGGAAATCAGCTGGACGATTACGTAACAAGACTAAACACCATTCTTTCTCAGAAGGCTGCTGGCATTCTGCAGTTGCAAAACCGTTTAGCTCATTTTCAGAAACGTTTAAAGGAGCATAATGTCTTGGTTTCATCTTCCGGTTACTAG 2097 0.4263 MNGGGRQGLRSSGATGVHHQRQYSENFLDGATTGNRWLQSAGLQHLQSSAANPLQDYNLYGGGAQGGRMYRNAQRSYNGGGSDYYMEPASPPDAFRASNLKMNGEDSTGDFSPGLLDLHSFDTELLPEIPASNPYESNSLYRVRSFDDTEPYMMSKQTAKARAPDNALKTLPAEKDKTSSVAKIKVVVRKRPLNKKELAKNEEDIIETYANSLTVHETKLKVDLTQYLEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLYDLLNDRKKLCMREDGSKQVCIVGLQEYRVADVENIKDLIEKGSATRSTGTTGANEESSRSHAILQLAIKRSVDGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSNFNLKESITVPLSSVTAPAYEDSTADAWRDENEGDDLSPPEEYYEQVKPPLKKNVRMESYAMTDDKLKKPSGLVKWKDLPKPEPKPTNSEDDLSALLQEEEDLVNAHRTQVEETMNIVREEMNLLVEADQPGNQLDDYVTRLNTILSQKAAGILQLQNRLAHFQKRLKEHNVLVSSSGY 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04755 698 Coils Coil 672 692 - -
Trre11g04755 698 MobiDBLite consensus disorder prediction 1 20 - -
Trre11g04755 698 PRINTS Kinesin heavy chain signature 406 424 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre11g04755 698 PRINTS Kinesin heavy chain signature 372 389 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre11g04755 698 PRINTS Kinesin heavy chain signature 456 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre11g04755 698 PRINTS Kinesin heavy chain signature 263 284 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre11g04755 698 SMART kinesin_4 181 512 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre11g04755 698 MobiDBLite consensus disorder prediction 540 562 - -
Trre11g04755 698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 506 IPR027417 -
Trre11g04755 698 PANTHER KINESIN-RELATED PROTEIN 6 564 693 IPR027640 GO:0003777|GO:0007018
Trre11g04755 698 ProSitePatterns Kinesin motor domain signature. 405 416 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre11g04755 698 Gene3D Kinesin motor domain 157 509 IPR036961 -
Trre11g04755 698 Pfam Kinesin motor domain 189 505 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre11g04755 698 CDD KISc_KIF2_like 183 504 - -
Trre11g04755 698 FunFam Kinesin-like protein 164 509 - -
Trre11g04755 698 ProSiteProfiles Kinesin motor domain profile. 183 506 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04755 Trre-Chr11 58896788 58901288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04755 183 506 Calmodulin-binding Proteins AT5G65930 34.731 4.34e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04755 K10393 - gmx:100799100 1210.67