Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04713 ATGGCATCCCTTGTATTCAGTTGCTTTATCATTTTCTTGGTTTCTGTCACTACTGTTCAATCTGCAAGACAATTCCATGTTGGTGATCATTTGGGTTGGCGTCAACCTGATCAAAACAACACTGCTTTTTACACTCAATGGGCTCAAAAAAACAGATTCCAAATCGGAGACTCTCTCGTATTTGAGTATGAGAATGATTCAGTTCTTAGTGTGGAGAAATTTGATTACTTTAACTGTGACACAAGTGAACCTATCACTACTTTTACCAATGGAAAGAGCACTCTTAATCTTGACAGATCAGGACCTTTCTACTTCATAAGTGGAACTGATGATCATTGCAACCATGGTCAAAAATTGCTCGTTGAAGTTATGGCGCCGCATTCAATTCCAGCATCTCCACCCACCACAATTGCAGTTCCGCCTCAAGGTTCATCACCAAACATGGCTCCTTCGGATTCGCCTTATTCTTCTGATACCTTTGATCAGGATTCTTCATCATCCACCATGGTGCTTGCTTCAAGTTTTCTGTCTACTTTGATCACATTTGGAATTGTGATGATGTTAGCACTTTAA 573 0.4014 MASLVFSCFIIFLVSVTTVQSARQFHVGDHLGWRQPDQNNTAFYTQWAQKNRFQIGDSLVFEYENDSVLSVEKFDYFNCDTSEPITTFTNGKSTLNLDRSGPFYFISGTDDHCNHGQKLLVEVMAPHSIPASPPTTIAVPPQGSSPNMAPSDSPYSSDTFDQDSSSSTMVLASSFLSTLITFGIVMMLAL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04713 190 PANTHER BLUE COPPER PROTEIN 22 142 IPR039391 GO:0009055
Trre11g04713 190 Pfam Plastocyanin-like domain 38 117 IPR003245 GO:0009055
Trre11g04713 190 Gene3D - 22 133 IPR008972 -
Trre11g04713 190 FunFam Early nodulin-like protein 1 22 128 - -
Trre11g04713 190 CDD OsENODL1_like 23 124 IPR041846 -
Trre11g04713 190 SUPERFAMILY Cupredoxins 22 124 IPR008972 -
Trre11g04713 190 MobiDBLite consensus disorder prediction 131 161 - -
Trre11g04713 190 MobiDBLite consensus disorder prediction 141 161 - -
Trre11g04713 190 ProSiteProfiles Phytocyanin domain profile. 23 125 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04713 Trre-Chr11 58619310 58619972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04713 8 127 Phytocyanin Superfamily AT1G79800 51.667 5.02e-44 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04713 - - tpra:123905166 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04713 11 58619310 58619972 Trre11g04713 11 58619310 58619972 ECH