Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04679 ATGGCTTCAGAAAGAAAAATGAAGAAGAATAGTAGAGAAGTATTTTTTGTTATCTTTGCATTTGTGTTGTTGACATGGAGTGTGAATGCACAAGATGATGCTATTGTCCCAGCAATCATTACATTTGGTGACTCTGCTGTTGATGTGGGAAACAATGACTATCTTTACACTCTTTTCAAAGCTAACTATCCTCCTTATGGAAGAGATTTTGTCAACCATAGACCCACTGGGAGGTTTTGTAATGGAAAATTAGCTACTGATATTACTGCTGAAACACTGGGTTTTACGCGATATGCCCCTGCCTATCTTAGCCCTCAAGCAACAGGAAAAAACCTTCTTATTGGAGCAAATTTTGCTTCAGCTGCACCCGGTTATGATGAAAAGGCTGCTATTTTGAATCACGCGATTCCATTGTCGCAACAGTTACAATATTACAAGGAATATCAAAGCAAACTGACCAAGATAGCTGGTAGAAAAAAAGCAGCATCAATTATTAAAGGTGCATTGTACCTATTGAGTGGTGGAAGTAGTGACTTTATTCAAAACTATTATACCAATCCTTTAATCAACAAATTTGTTACTCCTGATCAATATTCTTCATACCTTGTGGATACATTCTCAAGCTTTGTTAAGGGCTTGTATAAATTGGGAGCTAGAAAAATTGGAGTAACTTCACTTCCACCATTGGGTTGTCTACCTGCTACAAGAACTTTATTTGGATTTCATGAGAAAGGTTGTGTCACAAGAATCAACAATGATGCACAAGGATTTAACAAGAAAATGAACTCGACCGCAGCGAGACTCCAAAAGCAACTTCCTGGTCTTAAGATTGTTGTCTTTAATATTTACAAACCTCTCTATGACCTTGTTCAATCCCCTTCAAATTTTGGTTTCACGGAAGCAAGGAGAGGCTGCTGCGGAACTGGGATTGTAGAGACGACATCCTTATTGTGTAATCCAAAATCACTAGGAACATGTTCTAATGCAACTCAGTATGTGTTTTGGGACAGTGTTCATCCTTCGGAAGCTGCTAACCGAGTTCTAGCCGATGCATTGATCGTACAAGGCATAAGCCTTATCGGTTAG 1086 0.3877 MASERKMKKNSREVFFVIFAFVLLTWSVNAQDDAIVPAIITFGDSAVDVGNNDYLYTLFKANYPPYGRDFVNHRPTGRFCNGKLATDITAETLGFTRYAPAYLSPQATGKNLLIGANFASAAPGYDEKAAILNHAIPLSQQLQYYKEYQSKLTKIAGRKKAASIIKGALYLLSGGSSDFIQNYYTNPLINKFVTPDQYSSYLVDTFSSFVKGLYKLGARKIGVTSLPPLGCLPATRTLFGFHEKGCVTRINNDAQGFNKKMNSTAARLQKQLPGLKIVVFNIYKPLYDLVQSPSNFGFTEARRGCCGTGIVETTSLLCNPKSLGTCSNATQYVFWDSVHPSEAANRVLADALIVQGISLIG 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04679 361 SUPERFAMILY SGNH hydrolase 39 352 - -
Trre11g04679 361 CDD SGNH_plant_lipase_like 37 353 IPR035669 -
Trre11g04679 361 Gene3D SGNH hydrolase 27 356 IPR036514 -
Trre11g04679 361 PANTHER GDSL ESTERASE/LIPASE EXL3 21 352 - -
Trre11g04679 361 FunFam GDSL esterase/lipase APG 28 357 - -
Trre11g04679 361 Pfam GDSL-like Lipase/Acylhydrolase 39 351 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04679 Trre-Chr11 58316679 58318369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04679 37 353 Pollen Coat Proteome AT1G75910 35.625 8.21e-61 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04679 - - gmx:100795716 602.438