Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04673 ATGGCAGGACATTTGCTACTTATAATGTTTTTACTTTCTTTAACTCCTCCTTTCATTGTTCATTCCAAGAACAACCAATTAGGATTCATTAGTATTGACTGTGGACTAGTAGATAAACCAAGCTACACAGATGAAACTACTTCCATCTATTACACTTGGGATGTTAACTTCACAGATACTGGTGTAAGTAAAAGCATATCATCTAAACACAAAGCTTCCCTTGAAAGACAGTTTTGGAATGTTAGAAGTTTCCCAAAAGGAACAAGGAACTGCTACACACTTTTTGTTTCACAAGGAAGTAGCAAGAAGTATTTAGTCAGGGCCAGTTTTGTGTATGGTAATTATGATGGCAAAAACTCTCTTCCTGAATTTGATATCTATCTTGGAGCTAAATGGTGGGAATCTGTAGTGTTTGAAGATTCATCTAGTGTAATAACCAAGGAAATCATTTTTGCTTCTTCTTCAGATTATGTTCATGTTTGTTTGTTTAATACTGGCAAGGGTACACCTTTTATTTCAGTTTTAGAGCTTAGAGTTCTAAACAGTGATTCTTATCTTGTTAACTCTTTGGAGCTTTTGGGGAGGTTTGATGTAGGCTTACAGAGTAGTCAAAAAATCAGATATCCAGATGATATTTATGACAGAACATGGACACCTTATAACTCAAATCACTGGAAAATGGTAAATACTTCACTCACCATAGACCAAGGAGCACCTTCATTCAACTTTTTACCACTACCACCTTCCACTGTCATGAGAACAACATCAATTCCAGAAAATTTCAGTGACAACATAGAATTTCACTTCCTTCCTAAGTATAATGCCTCAAGATATTATGTGTACATGTTCTTTGCTGAAATCCAGAAACTCGAGGCGAATCAAATTAGAGAGTTTAACATTTTTGTAAATGGAAAGCTTTTAAATAATGATCCACTCATTCCTTTGTATCTTCAAAGCATGTATTATATATCAGTTATAGATGAAAATAAGTTGGAATTTTGGTTTAATAAGACTAGTAGATCAACTCTTCCACCACTTTTCAACGCGATCGAGATATTTATGACCAAGGACTTCTTACAATCAGAAACATATCAAACGGACGTTGATGCTATCCTAAATGTGAAGTCAATTTATGAGATCAAGAGAAACTGGCAGGGAGATCCTTGTACTCCAGTGTCTTACTTGTGGAAAGGTCTAAACTGCAGCTATGCTGGATCTAATTCACCAAGGATCGTATACTTGAACTTAACTTCTAGTGGTTTAATTGGAAATATAGCTCCTGCCATATCCAATCTGAAATCAATAGAATATTTAGATTTGTCGAATAACAGTTTGACCGGAGCTGTGCCTGATTTCCTATCTCAGCTCCGCTTCTTGCGAGTTCTAAACCTTGAAGGAAATCAATTAGCAGGAGCAATTCCAATACAACTCCTCATGCGATCAGAGAATAGTATGCTCAAATCCAATTTTGGTGGAAATCCAAATCTTTGCTCCTCAGGTTCATGTAACAAGATGAATAAGGTTGTAGTTCCATTAGTAGCATCACTTGGTGGTGCTTTCATGATATTAGCAGTAGCAACGATTTCTTTTCGCATATACTACAAGAGACACCAAGTTTCCCATCATGTAAGCAAGATGGGTGGTTATTCAAGAATAAAGCAGGAACTAGAGTCAAAGAAACAAGAATTCACCTATGAAGAAGTATTAACCATTACCAGAAACTTTGAAAAGGTTGTGGGGAAAGGAGCATCTGGAACAGTCTATCATGGCTGGATTGATCATGATACTGAGGTAGCTGTCAAAATGCTATCTTCCGAATCAGTTCAAGGATATATGCAATTTCAAGCAGAGGCCAAACTTTTTGCCGTAGTTCATCATAAATACTTGACTGGTCTTATAGGTTACTGTGATGATGGCACCAACATGGCTCTCATCTATGAGTATATGGCTAATGGAGACTTAGCCAAACACTTATCAGATAAAAGTGAACATATATTGAGTTGGAATCAACGACTTCAAATTGCGGTGGATGCTGCAGAAGGATTGGAGTATCTGCATCATGGCTGTAATCCGCCAATTGTTCATAGAGATGTTAAATCTAAAAACATCTTACTAAATGAAAAATTCCAAGGTAAACTAGCTGATTTTGGGTTGTCAAAGATCTTTCCTAACGAAGGCGACACTCATATCTTCACGGTTGTTGCTGGAACGATAGGATACCTCGACCCCGAGTACAATAGATTAAGCAGGTTGAAAGAAAAAAGTGATGTTTTTAGTTTTGGAGTAGTTTTGCTTGAGATAATTACAGGACAACCTGCCATAATCAAAACTGAAGAGAAAATCCATATTATTCAATGGATTAATTCTATGCGGCTCGAAAGAGAGGTAAAGGATATTGTGGATCCCAGATTAAAGGGAGAATTTGATATTAACTTTGCAACAAAAGCTTTGGATATTGCAATGGCTTGTGTAGCAAAAACTTCAATCAATAGGCCAACCATGAGGCAAGTACTTATGGAACTTAAACAATGTTTGGAGAACAAGATAACTGATTTATCTGACTCTGATTACACTCCTGAGAGTTTACCAGACACCTTTAATTCTGTATCTTTCGACAGAATTAGTGGCGAGAGCTCTCTAGCGAGGTAG 2649 0.3681 MAGHLLLIMFLLSLTPPFIVHSKNNQLGFISIDCGLVDKPSYTDETTSIYYTWDVNFTDTGVSKSISSKHKASLERQFWNVRSFPKGTRNCYTLFVSQGSSKKYLVRASFVYGNYDGKNSLPEFDIYLGAKWWESVVFEDSSSVITKEIIFASSSDYVHVCLFNTGKGTPFISVLELRVLNSDSYLVNSLELLGRFDVGLQSSQKIRYPDDIYDRTWTPYNSNHWKMVNTSLTIDQGAPSFNFLPLPPSTVMRTTSIPENFSDNIEFHFLPKYNASRYYVYMFFAEIQKLEANQIREFNIFVNGKLLNNDPLIPLYLQSMYYISVIDENKLEFWFNKTSRSTLPPLFNAIEIFMTKDFLQSETYQTDVDAILNVKSIYEIKRNWQGDPCTPVSYLWKGLNCSYAGSNSPRIVYLNLTSSGLIGNIAPAISNLKSIEYLDLSNNSLTGAVPDFLSQLRFLRVLNLEGNQLAGAIPIQLLMRSENSMLKSNFGGNPNLCSSGSCNKMNKVVVPLVASLGGAFMILAVATISFRIYYKRHQVSHHVSKMGGYSRIKQELESKKQEFTYEEVLTITRNFEKVVGKGASGTVYHGWIDHDTEVAVKMLSSESVQGYMQFQAEAKLFAVVHHKYLTGLIGYCDDGTNMALIYEYMANGDLAKHLSDKSEHILSWNQRLQIAVDAAEGLEYLHHGCNPPIVHRDVKSKNILLNEKFQGKLADFGLSKIFPNEGDTHIFTVVAGTIGYLDPEYNRLSRLKEKSDVFSFGVVLLEIITGQPAIIKTEEKIHIIQWINSMRLEREVKDIVDPRLKGEFDINFATKALDIAMACVAKTSINRPTMRQVLMELKQCLENKITDLSDSDYTPESLPDTFNSVSFDRISGESSLAR 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04673 882 Gene3D Ribonuclease Inhibitor 368 489 IPR032675 -
Trre11g04673 882 Gene3D Transferase(Phosphotransferase) domain 1 649 860 - -
Trre11g04673 882 SUPERFAMILY L domain-like 370 496 - -
Trre11g04673 882 Pfam Protein kinase domain 576 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04673 882 SMART serkin_6 573 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04673 882 ProSiteProfiles Protein kinase domain profile. 573 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04673 882 Gene3D Phosphorylase Kinase; domain 1 554 648 - -
Trre11g04673 882 Pfam Leucine rich repeat 410 469 IPR001611 GO:0005515
Trre11g04673 882 SUPERFAMILY Protein kinase-like (PK-like) 558 841 IPR011009 -
Trre11g04673 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Trre11g04673 882 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 649 853 - -
Trre11g04673 882 FunFam Leucine-rich repeat receptor-like kinase 366 499 - -
Trre11g04673 882 ProSitePatterns Protein kinases ATP-binding region signature. 579 601 IPR017441 GO:0005524
Trre11g04673 882 Pfam Malectin-like domain 32 354 IPR024788 -
Trre11g04673 882 PANTHER OS07G0107800 PROTEIN-RELATED 30 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04673 Trre-Chr11 58272259 58276954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04673 5 845 Receptor kinase-like Gene Family AT2G19210 47.725 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre11g04673 Malectin_like 1.5e-99 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04673 - - psat:127087401 1504.58