Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04659 ATGAATTGGTTAACTAATCGTTGGACAGGCGTCGCCGCCGCAATATGGATCCAATGGAGCTGCGGTGCATCATACACTTTCAGCATCTACTCACCTCTCCTCAAATCCACACAAAACTATTCCCAATCTACGCTTGACACCGTTTCCGTTTTCAAAGACATCGGAGCTAACTTCGGCGTTCTTTCCGGTCTCCTTTACTCCGCCGTCACACCTTACGGTGATCGGCAACCACAGTCTAAATCTAAATGGAGTTCTTTTGGTGGGCCTTGGATTGTTGTTGCTGCCGGTGCTGTTCAGTGTTTTGTGGGCTTTTTCTTTATCTGGGCTTCTGTTGTGGGCTTCATTCATCAGCCACCTGTTGCTGTAATGTGTTTTTTCGCTTGGCTTGCTGCTAATGGACAAACTTTCTTGAATACTACAAATGTTGTTACTGGGTTGCGTAATTTTCCTCAATACAGTGGCACCATCATTGGTATCATGAAGGGTTTTCTTGGGCTTAGTGGAGCTATCTTGATTCAACTGTATCATACATTTTTCGATGGTGACCCAGCCACCTTCCTTCTGATGCTAGCTTGCTTACCTGCAATCATCTGTTTGTTGTTTATGTTTCTGTTGAAGATCTATCAAGTGCAAGACCATGATTACAAGAAGCATTTGGATGATTTCTCCACGGTCACTGTCATTATTGTTGTGTATCTCATGTTTATAATAGTTTTGCAGAATTTCGTGAGCTTATCGTATTGGGCACGGGTTTTTACATTTGTTGTCCTTATGGTTCTATTAGCATCGCCTTTTGGCATTGCCGTGAAAGCTCATTGGGAGGATTCGAGGATATTTTCACAAGCTCGCTCCATTGAGACTACTGCCCCTACAATAGAATACCAAGCGCTGCCTGGAGAGGAGGTGCAAGTGCGTAATACTTTAGATGATGTGTTGCCCCTTGAACAAGAAAAGAACCTATTACAAGCTATGTGTACTGTTGAATTTTGGATGTTGTTTGCGACCATGATATCCGGTTTGGGTTCTGGGCTGGCAACAATAAATAATATGAGCCAAATAGGACAATCTCTTGGATATAGTACTATTGAGATTAGCAATATGGTGTCATTGTGGAGTATGTGGAATTTTCTTGGCCGGTTTGGTGGCGGCCATTTATCCGATTATATCATGCATAAAAGAGGTTGGCCGAGGCCCCTGTTGATGACTGTAACTCTGGGGATTATGATTCTTGGTCATTTAATCATAGCTTCTGGTTTCCCTGGAAATTTTTATTTGGGTCCTGTTCTGGTGGGAATATGCTATGGTACAAATTGGTCCTTAATGCCAACAATCACTTCAGAGATATTTGGTGTGAAGCACATGGGTACCATTTTCAACACTATTGCTGCATCAAGTCCACTTGGGTCATATATACTTTCTGTGAGAGTAGTTGGATATATATACGACAAGGAAGCCAATAAAGAAGATAACTCATGCTTCGGCATCCACTGTTTCATGTTGTCGTTTCTGATCCTAGCCGGTGTGGCTTTTCTGGCATTTTTGGTCGGTCTAGCGTTGTATTTCCGGACCCAAAGGTTCTATATGCAAGTTGTGATTAGAAAATTAAACTATTATGCGCGATGA 1623 0.4245 MNWLTNRWTGVAAAIWIQWSCGASYTFSIYSPLLKSTQNYSQSTLDTVSVFKDIGANFGVLSGLLYSAVTPYGDRQPQSKSKWSSFGGPWIVVAAGAVQCFVGFFFIWASVVGFIHQPPVAVMCFFAWLAANGQTFLNTTNVVTGLRNFPQYSGTIIGIMKGFLGLSGAILIQLYHTFFDGDPATFLLMLACLPAIICLLFMFLLKIYQVQDHDYKKHLDDFSTVTVIIVVYLMFIIVLQNFVSLSYWARVFTFVVLMVLLASPFGIAVKAHWEDSRIFSQARSIETTAPTIEYQALPGEEVQVRNTLDDVLPLEQEKNLLQAMCTVEFWMLFATMISGLGSGLATINNMSQIGQSLGYSTIEISNMVSLWSMWNFLGRFGGGHLSDYIMHKRGWPRPLLMTVTLGIMILGHLIIASGFPGNFYLGPVLVGICYGTNWSLMPTITSEIFGVKHMGTIFNTIAASSPLGSYILSVRVVGYIYDKEANKEDNSCFGIHCFMLSFLILAGVAFLAFLVGLALYFRTQRFYMQVVIRKLNYYAR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04659 540 SUPERFAMILY MFS general substrate transporter 4 206 IPR036259 -
Trre11g04659 540 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 528 - -
Trre11g04659 540 Gene3D MFS general substrate transporter like domains 320 526 IPR036259 -
Trre11g04659 540 CDD MFS_Mch1p_like 7 512 - -
Trre11g04659 540 ProSiteProfiles Major facilitator superfamily (MFS) profile. 327 540 IPR020846 GO:0022857
Trre11g04659 540 Pfam Nodulin-like 89 268 IPR010658 -
Trre11g04659 540 Pfam Nodulin-like 7 68 IPR010658 -
Trre11g04659 540 Pfam Major Facilitator Superfamily 332 524 IPR011701 GO:0022857|GO:0055085
Trre11g04659 540 SUPERFAMILY MFS general substrate transporter 246 525 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04659 Trre-Chr11 58210665 58213264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04659 1 537 Nodulin-like Gene Family AT1G74780 55.699 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04659 - - gmx:100775628 878.626