Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04651 ATGAGTCGAGAACAACCGAAGCGAGGGAAGCATGAAAAAAGTTGTGATGGTGCTAAGAAGGTTATTGTTGCTGTCAAGGCATCAAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCTCTAACTCATGTTGTTCAACCTGGTGATTGCATTACACTTCTTGTGGTTGTACCTTCACAAAGTTCAGGCCGAAAATTATGGGGTTTTCCGAGGTTTGCTGGTGACTGTGCTAATGGACACAAGAAGTCAACAATACTGGGAGCTAGTTCAGAGAACAAGAATGATATCACTGATTCTTGCTCTCAAATGATCCTTCAGCTCCATGATGTTTATGATCCAAATAAGATAAATGTCAGGATTAAAATTGTTTCTGGATCACCTTGTGGAGCGGTGGCTGCAGAAGCCAAGAAAGCTCAAGCCAATTGGGTCGTCTTTGATAAACATCTCAAGCATGAAGAAAAACAATGCATGGAAGAACTTCAGTGTAACATTGCGGGTATGAAAGGTTCCCAACCGAAGGTACTCCGCTTCAATTTGGTAGGATCGCAAAAGAAGGATCTTGATGAAACTTGTTCATTACCTTCTGAGCAGCACGATATGCCTGGAAAACAATCGAAGAAGAAGAATGGTTCTTTGAAATCTACAATAGGACAAGTTGTCACGCCAACTAGCAGCCCTGAGTTAGAGACGTCATTTACTGCAACTGAAGTTGGAACTTCATCGGTTTCAAGCTCCGATCCTGGAACTTCCCCGTTTTTTGTCTCCGAAATCATTGCCGAGTCAAAGAAAGAGGAAACTATTGAAGAAAATCAAGAAACTGATGGTACTATCTCTGACACAGACAGTGAAAATTTGTCCACATCTTCAGCAAGCTTGCGATTTCAGCCGTGGGTTACAGATCTTTTTTTGCATAAACAATCTTCTCAACGTGAAGAAGAAAGGTCAGAGAGTTCTCGTTCTCATGATAGGCTTGAAACGTCTACAACTAGAGCTTTGCTAGAAAAGTTCTCCATGCTTGACAGAGAAGCCGAAATAGAAACCTCGGCCTTTAAGACTGACTTGGAATTCAGTGGAAGCATAAGAGAAGTGGTATCATTATCTAGAAATGCCGCACCTGGTCCACCTCCATTATGTTCAATATGTCAACACAAGGCTCCAGTTTTTGGGAAACCTCCAAGATGGTTCAGCTATGCTGAGTTGGAGCTAGCTACTTGTGGATTTTCACCGGACAATTTCTTGGCAGAAGGAGGATATGGATCTGTTCACAGAGGAGTTCTACCAGAAGGGCAAGTTATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATCTTGAATTCTGCTCGGAGGTTGAAGTCCTGAGTTGTGCTCAGCACCGAAATGTTGTTATGTTGATCGGGTTCTGTATAGAGGATAAGAGAAGGTTATTGGTTTATGAATACATATGCAACGGATCATTGGATACTCATCTATACGGGAGACAACGGAAACCATTAGAATGGTCTGCACGTCATAAAATTGCCGTTGGTGCTGCTCGAGGTTTGCGATATCTTCATGAAGAGTGCAGAGTGGGATGCATCGTCCATCGTGACATGCGGCCTAACAACATTCTTATCACTCATGATTTTGAACCACTGGTTGGTGATTTTGGACTAGCAAGGTGGCAGCCTGATGGAGACACTGGAGTAGAAACTAGAGTCATTGGGACATTTGGGTATTTGGCTCCCGAATATGCTCAAAGTGGACAAATAACTGAAAAGGCTGATGTTTATTCTTTCGGAGTGGTATTAGTGGAGCTTGTGACAGGTCGTAAAGCTGTGGATATCAATCGGCCCAAGGGACAGCAGTGTCTTACCGAGTGGGCACGACCACTATTAGAAGAGTATGCCATTGAGGAACTGATTGATCCAAGGTTGGGAAGTCACTATTCAGAACACGAGGTCACTTGCATGCTACATGCGGCATCCTTATGCATAAGGCGAGATCCTTATTCTAGACCACGCATGTCACAGGTTTTGCGAATACTAGAGGGCGACACAGTCATGGAATCACCACGCCATTTCGGAGGTTCCCCTTCCATTTGA 2085 0.4355 MSREQPKRGKHEKSCDGAKKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRKLWGFPRFAGDCANGHKKSTILGASSENKNDITDSCSQMILQLHDVYDPNKINVRIKIVSGSPCGAVAAEAKKAQANWVVFDKHLKHEEKQCMEELQCNIAGMKGSQPKVLRFNLVGSQKKDLDETCSLPSEQHDMPGKQSKKKNGSLKSTIGQVVTPTSSPELETSFTATEVGTSSVSSSDPGTSPFFVSEIIAESKKEETIEENQETDGTISDTDSENLSTSSASLRFQPWVTDLFLHKQSSQREEERSESSRSHDRLETSTTRALLEKFSMLDREAEIETSAFKTDLEFSGSIREVVSLSRNAAPGPPPLCSICQHKAPVFGKPPRWFSYAELELATCGFSPDNFLAEGGYGSVHRGVLPEGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDTHLYGRQRKPLEWSARHKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDINRPKGQQCLTEWARPLLEEYAIEELIDPRLGSHYSEHEVTCMLHAASLCIRRDPYSRPRMSQVLRILEGDTVMESPRHFGGSPSI 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04651 694 SUPERFAMILY Protein kinase-like (PK-like) 390 678 IPR011009 -
Trre11g04651 694 CDD STKc_IRAK 412 678 - -
Trre11g04651 694 Gene3D Transferase(Phosphotransferase) domain 1 482 688 - -
Trre11g04651 694 MobiDBLite consensus disorder prediction 190 227 - -
Trre11g04651 694 MobiDBLite consensus disorder prediction 259 287 - -
Trre11g04651 694 MobiDBLite consensus disorder prediction 304 325 - -
Trre11g04651 694 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 378 481 - -
Trre11g04651 694 FunFam Dual-specific kinase DSK1-like 12 167 - -
Trre11g04651 694 Gene3D HUPs 5 156 IPR014729 -
Trre11g04651 694 Pfam Protein tyrosine and serine/threonine kinase 411 675 IPR001245 GO:0004672|GO:0006468
Trre11g04651 694 PANTHER OS01G0750732 PROTEIN 158 682 - -
Trre11g04651 694 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 482 685 - -
Trre11g04651 694 ProSitePatterns Tyrosine protein kinases specific active-site signature. 527 539 IPR008266 GO:0004672|GO:0006468
Trre11g04651 694 Gene3D Phosphorylase Kinase; domain 1 378 481 - -
Trre11g04651 694 MobiDBLite consensus disorder prediction 206 227 - -
Trre11g04651 694 ProSiteProfiles Protein kinase domain profile. 406 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04651 Trre-Chr11 58146230 58149925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04651 386 679 Trihelix Transcription Factor Family AT1G70460 52.824 6.38e-99 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Trre11g04651 PK_Tyr_Ser-Thr 2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04651 - - gmx:100789216 1174.07