Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04585 ATGGCTTCAAATGAAGAACAAGGGTCCTCCGTTCTTATTGCCATTGATAAAGACAGCAATAGCAAACATGCTGTAAGATGGGCTGTTGATCATCTTTTGGACAAGAACTCATCATGCACTCTCATTCACGTTAGAACCAAGTCCCTACATTCAAGTGAATTTGATGCTGTACCTAAACAAGGTCGTGCACCAACTGAAGAAGAATTGCATCAACTTTTTCTTCCTTTCCGCGGATTTTGTGCTCGAAAAGGGATCATAGCAAAGGAACTGGTTCTGCATGACCTTGATGTTTCAAGTGCACTAACCGATTACATCATTGACAACTCTTTCATCGATGTTGTTGTTGGTGCTCCCCGCTGGAATAACGCTTTTATAAGGAAATTTAAAGATGTAGATGTGCCAACAAGCTTAATCAAGTCTCTGCCAGAAACTTGCACAGTGCATATTATATCAAAAGGAAAAGTGCATAGTATTCAAGCAACAGTTCCTTCTCAAACCATTACTATTTCTAGTCCACAGCCAAATTATTTGTCCAAAGAATTAAACAGAACATCATTATCACTGCGCCGCTATAGCAATGATGGTTTCAGTCAAAACAAAGATCCAAAAGTATCAAGATGTATGTCTCAAAGAGAGTTTTGTCCAAGGAGAACACTATCAGATGAAAGCCAAGATGCATTTTTATCCAGAAGCAGATCTACTAAAGTATCACCAACTAGCATGGAGACGAGTAGAACAACAAAGAAGTGTCGGTCGGCATCAGTCAGTAGAGAACTTGGTTTGGCGAAACAGAAGGACCATGAAGAATGGATCGGAGAAAATGCTAGACATGTCGAAGAGGCTGCATTGGATTTGGCAGAGACGGAATTGAAGACTGAGAAAGGAAAACAGGAAGAAGTCATAGCTGTGGATGAAGAAGTAATAACATTGAATGTAATTGAACAAAATAAATATATATTTAAAAGATACAATATTGAAGAAATTGAAGTTGCAACAAATTACTTTGATCTTGATGGCAAAATTGGTGAAGGTGGATATGGACCTGTTTTCAAAGGTGTGCTTGATAACCATGTTGTTGCAGTTAAGGCCTTAAGACCAGACATAACTCAAGGGGAGAAACAATTTCATCAAGAGGTCCTTGTTCTAGGCTCGATTAGACATCCCAACATTGTAATACTTTTAGGCGCATGTCCGGAGTATGGATGCCTTGTATATGAGTACCTAGAGAACGGAAGCTTAGAAGATCGCCTTTTCCGAAAAGATAACACACCGCCAATTCCATGGAAGACTCGTTTCAAAATAGCATCAGAGATTGCCACTGGCCTTCTTTTCCTTCACCAGACAAAACCAGAACCGGTTGTACATCGCGATCTCAAGCCAGCAAACATTTTGTTAGACAGAAACAAAGTCAGCAAGATCACTGATGTTGGTTTGGCAAGGCTAGTTCCGCCTTCTATCGCCAACAAAACAACTCAATATCACTTGACAGCTGCAGCCGGCACATTCTGCTATATTGATCCGGAGTATCAACAAACGGGACTATTAGGCGTAAAATCAGACATATATTCATTAGGTGTAATGCTGTTACAGATCATTACCGGAAAGCCTCCAATTGGGGTGGCTCATCTTGTTGAAGAGGCCATTCAAAATGATACTTTTGCAGAGGTTTTAGATCCGAGTGTGACCGATTGGCCGGTTGAAGAAGCTTTATCATTTGCTAAATTGGCTTTGAAGTGTTGTGAGATGAGAAAAAAGGATAGACCAAATCTTGCTACTGTCATTTTGCCAGAACTGATTAGACTGAGAGATCTATAA 1815 0.4011 MASNEEQGSSVLIAIDKDSNSKHAVRWAVDHLLDKNSSCTLIHVRTKSLHSSEFDAVPKQGRAPTEEELHQLFLPFRGFCARKGIIAKELVLHDLDVSSALTDYIIDNSFIDVVVGAPRWNNAFIRKFKDVDVPTSLIKSLPETCTVHIISKGKVHSIQATVPSQTITISSPQPNYLSKELNRTSLSLRRYSNDGFSQNKDPKVSRCMSQREFCPRRTLSDESQDAFLSRSRSTKVSPTSMETSRTTKKCRSASVSRELGLAKQKDHEEWIGENARHVEEAALDLAETELKTEKGKQEEVIAVDEEVITLNVIEQNKYIFKRYNIEEIEVATNYFDLDGKIGEGGYGPVFKGVLDNHVVAVKALRPDITQGEKQFHQEVLVLGSIRHPNIVILLGACPEYGCLVYEYLENGSLEDRLFRKDNTPPIPWKTRFKIASEIATGLLFLHQTKPEPVVHRDLKPANILLDRNKVSKITDVGLARLVPPSIANKTTQYHLTAAAGTFCYIDPEYQQTGLLGVKSDIYSLGVMLLQIITGKPPIGVAHLVEEAIQNDTFAEVLDPSVTDWPVEEALSFAKLALKCCEMRKKDRPNLATVILPELIRLRDL 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04585 604 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 307 407 - -
Trre11g04585 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Trre11g04585 604 MobiDBLite consensus disorder prediction 224 249 - -
Trre11g04585 604 SMART serkin_6 335 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04585 604 SUPERFAMILY Protein kinase-like (PK-like) 315 594 IPR011009 -
Trre11g04585 604 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 10 119 - -
Trre11g04585 604 CDD STK_N 10 153 - -
Trre11g04585 604 Pfam Protein kinase domain 337 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04585 604 Pfam Universal stress protein family 11 122 IPR006016 -
Trre11g04585 604 FunFam Os07g0541700 protein 408 498 - -
Trre11g04585 604 Gene3D Phosphorylase Kinase; domain 1 307 407 - -
Trre11g04585 604 ProSiteProfiles Protein kinase domain profile. 335 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04585 604 Gene3D Transferase(Phosphotransferase) domain 1 408 603 - -
Trre11g04585 604 Gene3D HUPs 9 128 IPR014729 -
Trre11g04585 604 PANTHER OS02G0152300 PROTEIN 11 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04585 Trre-Chr11 57770346 57773207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04585 89 604 Receptor kinase-like Gene Family AT5G12000 46.942 7.06e-169 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Trre11g04585 Pkinase 4.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04585 - - gmx:100814365 747.273