Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04550 ATGGGGAAACTTATGTATGTGGCTTTTCCACTGATAATAGCTTTTGCAGTGTTGAGCTTTGATCATGGAGTGGTAGCAGCGCCAACGCCACAGCCAAAGTTGAAGTGGCATTACTATAACGAAACATGCCACAACGCAGAGGTGTATGTCCGGCACCAAGTGAAGCTGTTATGGGATCAAGACAAAAGCATTACTGCTAAGTTACTACGCTTGGTTTACACCGACTGTTTTGTCACTGGCTGTGATGCATCGATACTGCTTGACGAAGGACCAAATCCCGAAAAAAAAGCACCACAAAACCGGGGACTTGGAGGATTTGCACTAATTGACAATATCAAAACTGTTCTGGAATCACGATGTCCTGGAGTTGTTTCCTGCGCTGATATACTCCATCTCGCTGCCAGAGATGCTGCTAAAATGGCAGGTGCACCTGGTTATCCAGTTTTCACAGGAAGAAAGGATGGCATGAAATCAGATGCTGCATCAGTAGACTTGCCGTCACCATCCATCTCATGGCAGGAATCTCTAGCATACTTTGAATCAAGGGGCTTGGATGTACTAGATATGACAACACTCTTAGGAGCACACACACTGGGTCAAACACATTGTAGCTTCATTCTTGATAGGCTGTATAATTACAACGGTACTGGAAACTCGGACCCAAGCATGGATGCTACTTTTCGAGACAAATTGAGAGGACTTTGTCCTCCGAAAACCAAGAAAGGTCAACATGACCCACTGGTATACCTAAACCCAGAATCTGGATCAGATTACATCTTCAGAGAATCATACTACAAAAGGATCCTTCGCAATGAAGCTGTCCTGGGAGTAGATCAACAATTACTATTTGGCAGTGACACTAAAGAGATCACCGACGAATTTGCTGCTGGATTTGAAGATTTTAGGAGGGAATTTGCTCATTCAATGTTCAAAATGGGAAATATCAAATTTTTAACAGGAAATCAAGGACAGATACGGAAGAATTGTCGATTCACAAATAAGTGA 1005 0.4308 MGKLMYVAFPLIIAFAVLSFDHGVVAAPTPQPKLKWHYYNETCHNAEVYVRHQVKLLWDQDKSITAKLLRLVYTDCFVTGCDASILLDEGPNPEKKAPQNRGLGGFALIDNIKTVLESRCPGVVSCADILHLAARDAAKMAGAPGYPVFTGRKDGMKSDAASVDLPSPSISWQESLAYFESRGLDVLDMTTLLGAHTLGQTHCSFILDRLYNYNGTGNSDPSMDATFRDKLRGLCPPKTKKGQHDPLVYLNPESGSDYIFRESYYKRILRNEAVLGVDQQLLFGSDTKEITDEFAAGFEDFRREFAHSMFKMGNIKFLTGNQGQIRKNCRFTNK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04550 334 FunFam Peroxidase 166 312 - -
Trre11g04550 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Trre11g04550 334 ProSiteProfiles Plant heme peroxidase family profile. 33 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 Pfam Peroxidase 50 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 Gene3D Peroxidase, domain 2 166 312 - -
Trre11g04550 334 PANTHER PEROXIDASE 25-RELATED 17 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 SUPERFAMILY Heme-dependent peroxidases 34 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 Gene3D - 37 333 - -
Trre11g04550 334 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g04550 334 CDD secretory_peroxidase 33 332 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04550 Trre-Chr11 57586994 57588610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04550 22 333 Peroxidase AT2G43480 63.694 3.69e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04550 K00430 - gmx:100797875 493.426