Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04532 ATGCTTGTTAACTCATGGATGGTGGAGTTTGAGATTGATGATAACAGCAATGGCGAGCCAGTAGGAAATGCTATTATGGGAGAGATTAGTAGCAGCATAGTTGACAAAGACATAGTTGACTGTAGTTCTTTGGATCCAACTGATGAACAGGATCAAGATGATAATATGACTCAAGATTCTTCTGGAGTGGACCAAATAGCGTCAGCAGTTCAACCAGTGTCGGTTGTGAGAATTGATGAACCCTATTTGGGTCAGGAGTTTGTATCGGAAGCTGAAGCCCATGCATTTTATAATGCATATGCTACACGTGTTGGATTCGTCATACGTGTTAGTAAGCTCTCAAGGTCAAGGCGTGATGGATCTGTTATTGGACGGGCTCTTGTTTGCAACAAAGAAGGATTCAGAATGCCTGACAAGCGGGAAAAGATTGTAAGGCAAAGGGCAGAAACAAGGGTTGGTTGCAGGGCAATGATAATGGTGAGGAAATTAAATTCTGGTTTGTGGTCTATAACAAAGTTTGTAAAGGAGCACACACATGATCTGACACCTGGAAGAGGCAGACGGGACTTCGTTTATGAGCAATATCCGAGTGGACATGACAGAGTTCGAGAACTATCTCAGCAGTTGGCCCTAGAGAAAAATCGATCTGAAACCTATAAAAGGAATCTTGAATTGTTATATGAGTACATCGAAGAGCATAATGAAACCGTTTCAAAGAAGATACAAGAAATAGTAGAGAGTGTGAAGGAGATGGAAGCCAAAGAACAAGAGAATCCTAGTCCTAGATAG 789 0.417 MLVNSWMVEFEIDDNSNGEPVGNAIMGEISSSIVDKDIVDCSSLDPTDEQDQDDNMTQDSSGVDQIASAVQPVSVVRIDEPYLGQEFVSEAEAHAFYNAYATRVGFVIRVSKLSRSRRDGSVIGRALVCNKEGFRMPDKREKIVRQRAETRVGCRAMIMVRKLNSGLWSITKFVKEHTHDLTPGRGRRDFVYEQYPSGHDRVRELSQQLALEKNRSETYKRNLELLYEYIEEHNETVSKKIQEIVESVKEMEAKEQENPSPR 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04532 262 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 9 255 - -
Trre11g04532 262 Coils Coil 202 222 - -
Trre11g04532 262 Pfam FAR1 DNA-binding domain 96 182 IPR004330 -
Trre11g04532 262 Coils Coil 234 254 - -
Trre11g04532 262 MobiDBLite consensus disorder prediction 41 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04532 Trre-Chr11 57455138 57457693 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre11g04532 FAR1 2.6e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04532 - - gmx:100806900 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04532 11 57455138 57457693 Trre11g04532 11 57455138 57457693 ECH
Trre11g04532 11 57455138 57457693 Trre7g03032 7 27543519 27547643 PCT