Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04524 ATGATGGATCACCAATCTGGCCAGGGATTTGATTCACATGGTAGTGACCTTAACATGATGGCAGAAACCAGTGAGAAACATGACAAAGTAGATGGCAACATTTCAAACAATTTAGAATTATGTGCAGTTGAAGATGAAAGGTTTGTTGAACAACCTGTGGCAGATTCAGACATAATAGAACCATTCATAGGCATGGAGTTCAACACAAGAGAGGAAGCCAGAGAGTTCTACAATGCCTATGGTAGACGGATTGGATTTACAGTACGAGTACACCATAACCGCCGTTCACGAGTTAATAACGAGGTTATTGGTCAAGATTTTGTCTGCTCAAAAGAAGGCTATCGAGCAAAGAAGTATGTGCACAGAAAAGATAGAGTGCTCCCTCCTCCACCACCCACCCGAGAAGGTTGTCAAGCCATGGTAAGGATGACTTTACAAGATGGAGGGAAGTGGGTTGTCACCAAATTTGAGAAGGAGCATACACATAAACTGATGAGTCCTAGTGAAGTTCCATGGCGAAGATCTGAGAAGCACCTGATTACTGAGGATGAGAAAGATAGGAGAATCCGTGCGCTATCACTCGAGTTGTACAACGAAAGGCAAAAGAACAAACGACGTTGTGCAGCATATGAAGAACAGATAAATATGATTCTGAATGACGTGGAAAAGCACACAGAACACATCTCTAAAAAAGTTGCTGATGTAGTTCGAAATATAAGAGAGATTGAGGAAGAAAAATCAGAGTCAAATGGAAGGTAA 759 0.4163 MMDHQSGQGFDSHGSDLNMMAETSEKHDKVDGNISNNLELCAVEDERFVEQPVADSDIIEPFIGMEFNTREEAREFYNAYGRRIGFTVRVHHNRRSRVNNEVIGQDFVCSKEGYRAKKYVHRKDRVLPPPPPTREGCQAMVRMTLQDGGKWVVTKFEKEHTHKLMSPSEVPWRRSEKHLITEDEKDRRIRALSLELYNERQKNKRRCAAYEEQINMILNDVEKHTEHISKKVADVVRNIREIEEEKSESNGR 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04524 252 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Trre11g04524 252 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04524 Trre-Chr11 57415467 57416428 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre11g04524 FAR1 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04524 - - gmx:100810283 406.371