Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04445 ATGGCTTCCTCCAAAACCAAAACCCTAAAGTCAACGTTCCTTCTCTTATGTCTCTTAGCCTCCTTCATCTATCCAATCAATTCTCATGGAGGAGGACATGATGATTCCGATGCCGACCACGATTCTTCCGATTCCGATTCCAACAACGTAAACCTACGTTCGAAGAGTTTAATCCTTGTCAAAATATGGTGTTTAATCATCTTATTTGTATCCACTTTCTTAGGTGGTGTGTCTCCTTATTATTTCCGATGGAATGAGGTTTTTCTTCTCTTAGGGACACAATTTGCTGCTGGTGTTTTTCTTGGAACATCTATGATGCATTTCTTGAGTGATTCAAATGAAACATTTGGAGATCTTACAACAAAAACTTATCCTTTTGCTTTCATGTTGGCTTGTTCTGGATATCTTTTAACTATGCTTGGTGATTGTGTGGTGGTTTATGTGACAAGTAATAGTCAAAGGGAAGCTAAAGTTGAGGAACTTGAAGGAGGAAGAACACCTCAAGAAGGAGAGGGAACTAATGAGTTAGCTATGGATGAGAGTAACGTTGCATTCATGAAGACTTCTAATGTGGGAGATACTATTTTGCTTATTATTGCACTTTGTTTTCATTCGGTTTTTGAAGGCATAGCTGTTGGAGTTTCAGGTACTAAGGCGGAAGCATGGAGGAATTTATGGACAATATCATTACACAAAATATTTGCTGCAATAGCAATGGGAATTGCATTACTTAGAATGTTACCAAAAAGACCATTAGTAACAACAGCAGCATATTCATTTGCATTTGGTATCTCAAGTCCAATTGGTGTAGGAATTGGAATTGCAATTGATGCAACAACACAAGGTAAAACAGCAGATTGGATGTATGCAATATCAATGGGAATTGCTTGTGGTGTTTTTGTCTATGTTGCTATTAATCATTTAATGTCTAAAGGGTTCAAACCTCAAAGGAAAAGCAATTTTGACACTCCTTGGTTTAAGTTTCTTGCTGTGCTTTTTGGTGTTGCTGTTATTGCAGTTGTCATGATTTGGGACTAA 1038 0.3748 MASSKTKTLKSTFLLLCLLASFIYPINSHGGGHDDSDADHDSSDSDSNNVNLRSKSLILVKIWCLIILFVSTFLGGVSPYYFRWNEVFLLLGTQFAAGVFLGTSMMHFLSDSNETFGDLTTKTYPFAFMLACSGYLLTMLGDCVVVYVTSNSQREAKVEELEGGRTPQEGEGTNELAMDESNVAFMKTSNVGDTILLIIALCFHSVFEGIAVGVSGTKAEAWRNLWTISLHKIFAAIAMGIALLRMLPKRPLVTTAAYSFAFGISSPIGVGIGIAIDATTQGKTADWMYAISMGIACGVFVYVAINHLMSKGFKPQRKSNFDTPWFKFLAVLFGVAVIAVVMIWD 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04445 345 PANTHER ZINC/IRON TRANSPORTER 60 340 - -
Trre11g04445 345 Pfam ZIP Zinc transporter 59 341 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04445 Trre-Chr11 56753241 56756023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04445 25 345 Inorganic Solute Cotransporters AT1G55910 57.704 3.30e-136 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04445 K14709 - gmx:100791492 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04445 11 56753241 56756023 Trre11g04445 11 56753241 56756023 ECH