Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04440 ATGCTTACCACAAACACCTTTCTACAAGATTTCAGTGTTCCTAACACAGTAAACCCAGTAACAAATGGATTTGAGTTGGAAGATTCATCTTCATCACCTTCTTCTGCTGTCACAGGCTTATATGGAGATTATGAACACTCAAGATATTCCAACAGTATCCTAGGATACATAACTGACATCCTCATGGATGAAGAATATGATTTAGAGAACAAACCTTGTATGTTGCAAGAATGTTTAAGACTCCAAGCTGCTGAAAAATCATTCTATGATGTTCTTGGTCAAAAATATCCTCATTCATCATGTGATGATTCCACTGATCCAGAAGGAAATTTCGATCGGGCCGCTAGTTTTGAGAGCAAAAGCAGCAGCTGTACTACTGATAACTCATATGAGTCTGATTGGATCAACCTTGTTGGAGAATCTGACACTTATTCCTTACAACTACAAACCCCTTTTGTAGAACAAATCTACTCTGATTTGACAGAACCTGATCCAGTGGTAATTCAGCAACAAGCTGCTAGCCATTTTCAGAATGGAACTTGGAGTTGGAACGACATTCAGCCAGTGATGGTTGAAGAGATTTCAGCTGCTTCATTAGCACCAAGAGAAAAGAGAAGTTATAAGATAAATGATGATGAATCTTGTAATGAACAAGAGGGAAGAGGTAGCAAAATTTCAGCTATCTTCTCTGATGAATTAGAGCCACCAGAGATTTTAGATGAGGTACTGCTTTATCAGTCAGGAAGGAGTAAAAACCAACAACCATCGCAGAATCTCGATTCAGGAGGAAAGTCAAAGGCAACACGTTCGCGGCCAAATAAAGTATCTAATAACAATGCCCCAGCGGTGGATTTGTGGACCATGTTAACTCAATGTGCGCAGGCTGTCGCGAGCTACGATCAAAGGAATACAAATGAGCTACTCAAGCAGATTAGGCAACATTCTTCGCAATTTGGGGATGGACTCCAGCGTTTAGCTCATTACTTTGCCGATGGTCTTGAGATAAGATTGGCTGCCGAGACGCCATCATATAAGCCACTTGATGTGACTACTGCTGGAGATATGTTGAAAGCGTACAAAGTATTCGTTACCTCGTCTCCTTTGCAGAGAATGACAAATATGTTGTTAACCAATACGATTATCAGAGTAGTGAAGAACGACAACAGCTTTCACATTATCGATTTTGGAATTTGCTATGGTTTCCAATGGCCTTGCCTCATCAAAAGACTTTCATTAAGACCCGGTGGTCCTCCAAAGCTACGAATTACGGGAATTGATCTTCCTCAGGCAGGATTTAGGCCTGCAGAGAGGGTGGAGGAAACCGGTCGGCGTTTAGAAAACTTCTGCAAGAAGTTCAATGTACCATTTGAATACAACTGCATTGCACAAAAATTCGAAACAATCCGGCTCGAGGATCTAAAGATAGACAAGAATGAAATAACTCTTGTGAGCTGTTTATACAGACTGAAGAACCTGCCTGATGAAACGGTTGCAGACAATTGTCCAAGAGAAGCTTTGTTGAAGCTGATCAGGAAGATTAATCCAAAAATCTTCTTCCACGGAGTTGTCAATGGAAGTTATAGTGCACCGTTTTTCCTGACTCGGTTTAGGGAAGCATTATACCACTTCTCATCATTGTTTGATATGTTTGAGGCAAATGTACCTCGCGAAGACCCGCAGAGGTTGACGCTTGAGAGTGGATTGTTTGGTAGGGATGCCATAAATGTTATAGCTTGTGAAGGTGCAGAGAGAGTTGAAAGGCCTGAGACCTACAAGCAATGGCAGATCAGGAATAGGAGAGCTGGGTTGAAGCAAATCAGGTTGGATTCAGAGTTAGTGAATGAAACCAAAGCAATGGTGAAGAAGGAATACCATAAAGATTTTGTAGTTGATGAGGATGGTAAGTGGATTTTACAAGGATGGAAAGGGAGAATTTTGAATGCTTTATCTGCTTTGGTTCCTGCTTAA 1968 0.4111 MLTTNTFLQDFSVPNTVNPVTNGFELEDSSSSPSSAVTGLYGDYEHSRYSNSILGYITDILMDEEYDLENKPCMLQECLRLQAAEKSFYDVLGQKYPHSSCDDSTDPEGNFDRAASFESKSSSCTTDNSYESDWINLVGESDTYSLQLQTPFVEQIYSDLTEPDPVVIQQQAASHFQNGTWSWNDIQPVMVEEISAASLAPREKRSYKINDDESCNEQEGRGSKISAIFSDELEPPEILDEVLLYQSGRSKNQQPSQNLDSGGKSKATRSRPNKVSNNNAPAVDLWTMLTQCAQAVASYDQRNTNELLKQIRQHSSQFGDGLQRLAHYFADGLEIRLAAETPSYKPLDVTTAGDMLKAYKVFVTSSPLQRMTNMLLTNTIIRVVKNDNSFHIIDFGICYGFQWPCLIKRLSLRPGGPPKLRITGIDLPQAGFRPAERVEETGRRLENFCKKFNVPFEYNCIAQKFETIRLEDLKIDKNEITLVSCLYRLKNLPDETVADNCPREALLKLIRKINPKIFFHGVVNGSYSAPFFLTRFREALYHFSSLFDMFEANVPREDPQRLTLESGLFGRDAINVIACEGAERVERPETYKQWQIRNRRAGLKQIRLDSELVNETKAMVKKEYHKDFVVDEDGKWILQGWKGRILNALSALVPA 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04440 655 ProSiteProfiles GRAS family profile. 276 653 IPR005202 -
Trre11g04440 655 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 223 642 IPR005202 -
Trre11g04440 655 MobiDBLite consensus disorder prediction 208 229 - -
Trre11g04440 655 Pfam GRAS domain family 287 651 IPR005202 -
Trre11g04440 655 MobiDBLite consensus disorder prediction 249 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04440 Trre-Chr11 56706547 56712123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04440 49 654 GRAS Transcription Factor Family AT2G29060 43.887 1.62e-168 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre11g04440 GRAS 2.7e-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04440 - - cam:101504630 1012.29