Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04424 ATGCCCCGTGGAAGCTTGGAGAATCACGTGTTCAAGAGATATGTAAACTCATATCTTCAACCGCTTTCTTGGAGCCTCCGTCTGAAGGTTGCTCTTGATGCTGCCAAAGTGCTTGCGTTTCTGCACAGTGCTGAAACGAAAGTGATATTTAGAGATTTTAACGCAACAAATATCTTGTTGGATTCTGATTATAATGCAAAGCTTTCTGATTTTGGGTTGGCAAGGGATGGTCCAGATTCAGAAGATGACGAAAGCCACGTCTCGACCAGGGTAATGGGAACTGATGGATATGCAGATCCTGAATATGTAGCCTCAGGTCATCTTACTACTAAGAGTGATGTATATAGTTTTGGAGTTGTCTTGCTGGAAATGTTATCTGGTGAGAGGGTATTTGACAGGCGTAGACCAAAATTCAACTTGGTGGAATGGGCTAAACCATATTTGGCTAAGAAACGCAAGGTTTTCGGTGTGGTAGACGGCCGGCTTGAAGGGCAATATTCAGCAGATGAGGCCTACAAAGTAGCCACCCTTGCTTTGCGATGCCTGTCAGAAAAATCCAAGTCCCGGCCTAACATGGATGAAGTTGTTAGAACTTTGGAGCAGCTGATGCACGACCTTCAAATTGGCAGAACTGACTATTCTGCAGCCAGACCGGGGAAAGTACCATGCATGATTTTCGGGTGA 684 0.4503 MPRGSLENHVFKRYVNSYLQPLSWSLRLKVALDAAKVLAFLHSAETKVIFRDFNATNILLDSDYNAKLSDFGLARDGPDSEDDESHVSTRVMGTDGYADPEYVASGHLTTKSDVYSFGVVLLEMLSGERVFDRRRPKFNLVEWAKPYLAKKRKVFGVVDGRLEGQYSADEAYKVATLALRCLSEKSKSRPNMDEVVRTLEQLMHDLQIGRTDYSAARPGKVPCMIFG 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04424 227 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 1 212 - -
Trre11g04424 227 PIRSF ILK 1 213 - -
Trre11g04424 227 SUPERFAMILY Protein kinase-like (PK-like) 1 203 IPR011009 -
Trre11g04424 227 Gene3D Transferase(Phosphotransferase) domain 1 1 215 - -
Trre11g04424 227 Pfam Protein kinase domain 29 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04424 227 ProSiteProfiles Protein kinase domain profile. 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04424 227 PANTHER OS01G0588500 PROTEIN-RELATED 1 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04424 Trre-Chr11 56598473 56599468 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04424 1 220 Receptor kinase-like Gene Family AT3G58690 44.872 4.77e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre11g04424 Pkinase 7.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04424 - - gmx:100788856 294.664