Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04415 ATGGGAAAACAGTTGATTAATTCAGAGGAATCCACTCAAGTTAAAGAAGTTAATCAAGGATGCATGTGGGGCATGTTTAATATTCTTGATTACCATCAATGGGGTGTCAAAAGGGTGTTTCATCATAAAAAGAAAAGACATGACAGATATAAGAGAAAGACCACTTTGCAAGAACAACAAAATGTAGTTAGAGAAGCAGAATCCCACTTGGTTAGTCAACATAGAGAAATATCAAATGCTAAAGGTCAAACTAGTAGTGAGAATGCACTTCATCAGAAGAATGATGGAAATACAACAGAAAGTTCCCTTAAAAGAGACATTTCAATTAAATATAAGAACAGTGATGATGTTTTGGAGATAATTAGTGTGGAGAAGAATTTGTTATTCAAATTTCTAAGAGATATAGACTTTGGTGGTAAAAAAAATCATCAAGCAAGATTGACAAAATCAGGATCATTTCCTTTGCCTGCGTCTTCTAAGACGAAAGACATTAGCTCTAGTACCTTCCGATCCAAGCAAACGGAAATTTGGAACTTCCCTAAGGGAGAAAAGTTGCGTGCCGGCACTCAGGTACCGAAAAAGTTTGGATCAAGTTCAGTGAAAGATATTTCGTATGAAAAGCCGAAGCCTTCCGCGACTGATAATGGAATCGATAGTGTCGCTGCCGTGGAACAAAAATCAAGCATTTCTTCGAGGTCTTCTGAAGGATTAAACCACAAAGGATGGAATCAAGTGGTTATTCATCAATTCAAAGTTATAAAACAGAAGATAAAACATGCAATTGTGGAATTGAAAAAAAGTGGTCACAATAAAGCTTCACCTGAATACAGCATCATTGATAATGAGAAGGAGATAATCTCGCAAAGCTTAGACATTGGCGCGATTCATGAATACAAAAAGAGTAAAAGCTTGAGTGAGACTAAAGCTTCTGAAGCTCGTCTAATGCGAAGGACATCTTCTCTTAACGAATCGATGGATAGATATACTCAATTGTTTGAGAAAAGTTTAAGCAAAGAGGTTAAGTGGCAAAGCTCAAAGTCGAAAAGTTTAAGATTGACAAATGACGATAAGACTCAAAAGAGTAGGCATGCTCGTATGTTTTCCAGAAGCAATTTGTCTATGCCTAATCTCGAGGCATTAGGATTCATTCTACATGAAGCTCTTCTTGAAACAAATGATATGGGAAATAATACAGTGGAAAGTGATAATGATGTTCAAAGTAAATCAGCGAGCCTTCCTTTAAAGAACGATGAATCAACTGATCATTTTAAAGAGGCTGAAATTGATGAACTAATTGAAGGAAGTGGCAGAGATGTGAATCCTAGTCCTAGTTCTTTATCTGATAAGATGGTGGCGAAAATTGATGAAGGAGTTACCTGTGACCAAAGGGAGGACATACACGAACCAGCATCGGAACAAGAAGGAAAAGAATTGAATACACGAGGCTCAAATGCTAGTGTAACAGCCGCCGAAGACACAAACAAGAGTCTTCAAAATGATTTCTTGCACTTCAAGTCATATTCAGAAACCGATTCCAATTTCAAATATGTGAAAGATATTCTTGAATATTCGGGTTTCACGAGAAATGAGCAGACCCAAATGCGATACACAGTAGACCAGCCAATAAAACCGACCATATTCACGGCTTTGGAAGAATCTTTGCTTCATGAAAATGAATATTCCGGAGAAGAGAATACCAACATGTGTGATCACCAACTTCTATTTAACTTGATTAACGAGGTACTCTTTCAAATGTACGAAAACTCGCCAACTTACTTTCCGAAACCCTTCGCCTTCAACTACAAACTCAAATCAATGCCTAAAGGGAACTATCTTGTTAATGAAGTATGGGACAATGTTAGTTCATATTTGAGTTTGAGACCAGAGTTGGATGAGACATTAGATGATGTTGTCGGTCGCGATTTGACAAAGAGAAGTGGTTGGATGAATCTTCAACAGGAAGAGGAATATGTAGCACTTGAACTAGAGGAAATGATCATAGATGATTTATTAGATGAAATTATCTTCTCTTGA 2034 0.3707 MGKQLINSEESTQVKEVNQGCMWGMFNILDYHQWGVKRVFHHKKKRHDRYKRKTTLQEQQNVVREAESHLVSQHREISNAKGQTSSENALHQKNDGNTTESSLKRDISIKYKNSDDVLEIISVEKNLLFKFLRDIDFGGKKNHQARLTKSGSFPLPASSKTKDISSSTFRSKQTEIWNFPKGEKLRAGTQVPKKFGSSSVKDISYEKPKPSATDNGIDSVAAVEQKSSISSRSSEGLNHKGWNQVVIHQFKVIKQKIKHAIVELKKSGHNKASPEYSIIDNEKEIISQSLDIGAIHEYKKSKSLSETKASEARLMRRTSSLNESMDRYTQLFEKSLSKEVKWQSSKSKSLRLTNDDKTQKSRHARMFSRSNLSMPNLEALGFILHEALLETNDMGNNTVESDNDVQSKSASLPLKNDESTDHFKEAEIDELIEGSGRDVNPSPSSLSDKMVAKIDEGVTCDQREDIHEPASEQEGKELNTRGSNASVTAAEDTNKSLQNDFLHFKSYSETDSNFKYVKDILEYSGFTRNEQTQMRYTVDQPIKPTIFTALEESLLHENEYSGEENTNMCDHQLLFNLINEVLFQMYENSPTYFPKPFAFNYKLKSMPKGNYLVNEVWDNVSSYLSLRPELDETLDDVVGRDLTKRSGWMNLQQEEEYVALELEEMIIDDLLDEIIFS 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04415 677 MobiDBLite consensus disorder prediction 395 414 - -
Trre11g04415 677 Pfam Domain of unknown function (DUF4378) 514 673 IPR025486 -
Trre11g04415 677 MobiDBLite consensus disorder prediction 462 489 - -
Trre11g04415 677 PANTHER PROTEIN TRM32 72 677 IPR044257 -
Trre11g04415 677 MobiDBLite consensus disorder prediction 65 103 - -
Trre11g04415 677 MobiDBLite consensus disorder prediction 395 417 - -
Trre11g04415 677 MobiDBLite consensus disorder prediction 75 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04415 Trre-Chr11 56531632 56534676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04415 116 667 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 30.345 1.61e-43 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04415 - - cam:101509220 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04415 11 56531632 56534676 Trre11g04415 11 56531632 56534676 ECH