Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04372 ATGTCAAAACCTAGAACCTTCTTTTTCTTCAAACCATCACCACCACCACAATCATCACCACTACCACTTTCTTCACCTCCGCACAAGACCTTCTCCGACGCAATTATCGACGAAAACATCGAAAACGCACACTCTCTCATAACAAAATGGAACAACTCTATTTCCACAACTTCAAACCATTCTCAATATCTTTTCAACAACACGGAAGAAGCCAAACACTACCTTAAAGCTGTTAAGAGTCTACAATCTGCTATGCAGTACCTCGTCGCACAGGATTCCACCTCCAAGAAACTCATTGAAGCACAGTCTTTAATGAAACTCGCCATGAAGAATCTCGAAACAGAATTCTATAGAATTTTAGGACAAAATAGAGACCGGTTCAACTTAGAATCGGTCTCTGTTCTCTCTCGCTCTTCCACTGATCGTCGGAGTAGTTCCGACGATGAATTCTCTGATGAAGAATCGCAATCGCTCTCCGCTGAATCGGTATCAATGACTGCTATAGGTGATTTAAAAGCGATTGCAGAATGCATGATTTTCGCCGGTTATAGCAAAGAGTGTGTTAACATTTACGTAATTGTGAGAAAATCGATTGTGGAAGAAGCACTTTACAATCTCGGTGTTGAGAAACTGAGTTTCTCTCAGATTCAGAAGATGGATTGGGAAGTTCTTGAATGGAAGATAAAGACCTGGTTAAACGCCGTTAAAGTCGCTGTTAATACTCTGTTTCACGGCGAGAGAACACTCTGTGATTACATTTTTGAATCACCGGAGAAGAAAATCGCCGATTCATGTTTTACTGAGATTTGCAAAGACGGTGCTATGATGTTGTTTTCTTTCCCGGAAAACGTCGCAAAATGCAAGAAAACGCCGGAGAAAATGTTCAGAACGTTGGATTTATACGAAGCGATTTCCGAAAATTGGCAACAAATTGAATCAATCTTTTCATCGGAATCAAATTCCACGATCCGCTCTCAGGTGATAGCATCGCAAGTGAGACTCGGTGAAACCGTTAGAACAATGCTAACTGATTTTGAATCGGCGATTCAGAAAGAATCTTCGAAGGTTCCGGTACCAGGCGGAGGAATTCATCCTTTAACACGCTACGTCATGAATTACATCGCACTTCTCTCCGATTACGGCGACGCAATCGCCGATATAGTTTTCGATTGGCCACAATCACCGTTACCGGAATCTTACTACAAAAATCCATCTCACGATGAGAATAATCCACCGTCGGAGATAGCAAAACGGTTATCGTGGCTAATTCTTGTTGTTCTCTGTAAACTCGACGGAAAAGCTGAACTATACAAAGACGTTGCACTTTCGTACCTTTTTCTTGCGAATAACATGCAATACGTCGTCGTAAAGGTTCGTAAATCGAATCTAGGGTTTATTCTCGGCGAGGATTGGTTACTGAAACACGAAATGAAAGTGAAAGAGTACGTTACAAAATACGAACGCATGGCGTGGAGTAAAGTTGTGTCGTCGATTCCGGAGAATCGAACGGCTGAGAATGCGAGTGGAATATTCCAGAATTTCAACGTGGCGTTTGAAGAAGTCTTTAGAACACAGTATTTATGGGTCGTACCCGACCCGAAATTGAGAGAGGAAATTGGAGCGTGGTTAGATTTGAATGTTGTTTACAAGTACAGGGAGTTCTATGTGAAATATCGGGTCGGGTTGGATTCAGTTATAAGATATTCGCCCGAAGATTTGAGGAATTATCTATCGGAGATTTTGTGTGGTAGCGTTTCGTCGCATTCTCCTGATCGGTGA 1779 0.4199 MSKPRTFFFFKPSPPPQSSPLPLSSPPHKTFSDAIIDENIENAHSLITKWNNSISTTSNHSQYLFNNTEEAKHYLKAVKSLQSAMQYLVAQDSTSKKLIEAQSLMKLAMKNLETEFYRILGQNRDRFNLESVSVLSRSSTDRRSSSDDEFSDEESQSLSAESVSMTAIGDLKAIAECMIFAGYSKECVNIYVIVRKSIVEEALYNLGVEKLSFSQIQKMDWEVLEWKIKTWLNAVKVAVNTLFHGERTLCDYIFESPEKKIADSCFTEICKDGAMMLFSFPENVAKCKKTPEKMFRTLDLYEAISENWQQIESIFSSESNSTIRSQVIASQVRLGETVRTMLTDFESAIQKESSKVPVPGGGIHPLTRYVMNYIALLSDYGDAIADIVFDWPQSPLPESYYKNPSHDENNPPSEIAKRLSWLILVVLCKLDGKAELYKDVALSYLFLANNMQYVVVKVRKSNLGFILGEDWLLKHEMKVKEYVTKYERMAWSKVVSSIPENRTAENASGIFQNFNVAFEEVFRTQYLWVVPDPKLREEIGAWLDLNVVYKYREFYVKYRVGLDSVIRYSPEDLRNYLSEILCGSVSSHSPDR 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04372 592 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 574 IPR004140 GO:0000145|GO:0006887
Trre11g04372 592 Gene3D Exocyst complex component Exo70 55 589 - -
Trre11g04372 592 Pfam Exo70 exocyst complex subunit 230 579 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre11g04372 592 SUPERFAMILY Cullin repeat-like 55 580 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04372 Trre-Chr11 56191242 56193020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04372 9 584 EXO70 exocyst subunit family AT5G59730 48.020 0.0 531