Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04319 ATGTGCAAATCCAAAATGGCCATTGACGCCTCCACCCCCAAAAAATCAAAATCAACACCACCACAAAGAACATCATCATCATCCAAACCACCATCCACACGCGCAACCTCCACACCCACACGTGCAACCTCTCTTCCCAAAACTAAAACAAAAACCTCTTCATTCTCCAATAACCCTTCAACTTCCTACGCATCCACCACCGGTTCAACCGGTTTTCATCTCTCAACAGACACATCAATCTCAAGCAGAACATCTCTAACATCACTTCGCGACACACTTCCAGAAAATCCCAACATCTACGACTTCTCCGAAATCTGTTCCGCAACAAACAACTTCCTCTCAAAACGCTACTCATCTTCAACACCTTGCTGGCACTGTACTCTACGCGGCGCTGACGTCATCATTTTCCAACGCAAATTCCGACGCAAACTCCAAACCTCTCAGCTTCGTGAACTTCTCTCCGTCGTTTGTCGTAGTCACCACGTCAGCATAATCAAACTCCTCGGCGTTTCAATCTCCGGCGAACATATTTATCTCGTTTACGAATACGTTCACGGTGCTAATCTCTCCGATTGTTTACGAAATTCACGAAACGTTCATTTCACTGTTCTTTCTACATGGATTTCGAGAATGCAGGTTGCAACCGATCTCGCTCATGGACTCGATTACATTCATAATAAAACCGGTTTGAATTTCAATTTTGTTCACAATCATATCAAGAGTAGCGCGATCGTTGTTACCGAACCTGATTTCAATGCTAGGGTTTGTCATTTCGGTGTGGCGCAGCTTTGCGGTGAAGCCGTTGAGGAAAACGATATTGCGACTAAACAATTGGGGGAAATCACGGAGGAAGGTAGATCGAAGGAATTGAGAAGCTCCGACGTGCAATTCGAAGGTGTTCGGGGGTATATGTCGCCGGAATTTCAATCTACCGGCGTAGCGACTAAGAAGTCTGATGTTTATGCTTTTGGAGTGGTGCTGTTGGAGCTTTTGTCAGGAGAGGAACCGTTGAAGTTTAAATTTGATGAGAAGAAGCGTGATTTTAAGAGAATTTCGGTGATTGAATCGGCGAGAGCCGCCGTGGACGGCGGCGACGGGAGTGTGGAAGGGAAACTGAGGATGTGGGTGGATAGGAGATTGAAAGATTCATTTCCGGTTGATGTTGCTGAGAAATTGACACGTGTAGCGTTGGATTGTGTACACGTGGATCCAGATAAGAGGCCTAATATGGGACGCGTTGCTGGGAAAATATCCACGCTGTATTTGAAGTCAAAAAATTGGTCTGACAACATGAAAATGCCTGATATGTCCTTTTCATTAGGTCCTCGTTGA 1332 0.4542 MCKSKMAIDASTPKKSKSTPPQRTSSSSKPPSTRATSTPTRATSLPKTKTKTSSFSNNPSTSYASTTGSTGFHLSTDTSISSRTSLTSLRDTLPENPNIYDFSEICSATNNFLSKRYSSSTPCWHCTLRGADVIIFQRKFRRKLQTSQLRELLSVVCRSHHVSIIKLLGVSISGEHIYLVYEYVHGANLSDCLRNSRNVHFTVLSTWISRMQVATDLAHGLDYIHNKTGLNFNFVHNHIKSSAIVVTEPDFNARVCHFGVAQLCGEAVEENDIATKQLGEITEEGRSKELRSSDVQFEGVRGYMSPEFQSTGVATKKSDVYAFGVVLLELLSGEEPLKFKFDEKKRDFKRISVIESARAAVDGGDGSVEGKLRMWVDRRLKDSFPVDVAEKLTRVALDCVHVDPDKRPNMGRVAGKISTLYLKSKNWSDNMKMPDMSFSLGPR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04319 443 MobiDBLite consensus disorder prediction 1 69 - -
Trre11g04319 443 Pfam Protein kinase domain 142 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04319 443 Gene3D Transferase(Phosphotransferase) domain 1 185 437 - -
Trre11g04319 443 SUPERFAMILY Protein kinase-like (PK-like) 140 413 IPR011009 -
Trre11g04319 443 MobiDBLite consensus disorder prediction 11 69 - -
Trre11g04319 443 Gene3D Phosphorylase Kinase; domain 1 74 183 - -
Trre11g04319 443 PANTHER OS09G0572100 PROTEIN 1 443 - -
Trre11g04319 443 ProSiteProfiles Protein kinase domain profile. 61 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04319 Trre-Chr11 55701502 55702833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04319 95 439 Receptor kinase-like Gene Family AT1G51940 30.946 3.48e-40 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trre11g04319 Pkinase 1.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04319 - - gmx:100792694 589.726